ACHIEVEMENTS
研究業績
2025年
T., Omoto, Takayuki; N., Yamakawa, Nao; D., Wu, Di; H., Mori, Hitoshi; U., Takeda, Ushio; M., Hane, Masaya; K., Kitajima, Ken; C., Sato, Chihiro
An enhanced dual detection of DMB-labeled sialic acids using high-resolution accurate mass spectrometry and fluorescence detection
BBA Advances
K., Himori, Koichi; B., Zhang, Bingyuan; K., Hatta, Kazuki; Y., Matsui, Yusuke
HuTAge: A comprehensive human tissue- and cell-specific ageing signature atlas
Bioinformatics Advances
https://doi.org/10.1093/bioadv/vbaf072
J., Taboadela-Hernanz, Juan; Y., Ikagawa, Yuichiro; K., Yamauchi, Kosei; Y., Minoshima, Yui; H., Suga, Haruhisa; M., Shimizu, Masafumi
Biocontrol of Phytophthora Root and Stem Rot and Growth Promotion of Soybean Plants by the Rhizobacterium Enterobacter pseudoroggenkampii Strain GVv1 Isolated from Vicia villosa Roth
Microbes and Environments
S., Hirasawa, Shintaro; T., Yabe, Tomio
Salmon Nasal Cartilage Proteoglycan: Exogenous Functionality Compared to Other Chondroitin Sulfates
Reviews in Agricultural Science
R., Kondo, Reon; D., Mori, Daisuke; H., Wake, Hiroaki; N., Ozaki, Norio
Unraveling the enigma of mental disorders: a genetics-first approach and the role of mouse models based on rare disease-susceptible genome variants
Nagoya Journal of Medical Science
K., Hanzawa, Ken
Fut10 and fut11 as novel o-fucosyltransferases
Trends in Glycoscience and Glycotechnology
M., Yagi-Utsumi, Maho; S., Yanaka, Saeko; R.N., Burton-Smith, Raymond N.; C., Song, Chihong; C., Ganser, Christian; C., Yamazaki, Chiaki; H., Kasahara, Haruo; T., Shimazu, Toru; T., Uchihashi, Takayuki; K., Murata, Kazuyoshi
Microgravity-Assisted Exploration of the Conformational Space of Amyloid β Affected by Tottori-Type Familial Mutation D7N
ACS Chemical Neuroscience
J., Hirabayashi, Jun; Y., Guerardel, Yann
Introduction to a special issue, “Expanded glycomics: A bridge over future glycomics”
BBA Advances
S., Suzuki, Seichi; Y., Kizuka, Yasuhiko; B., Mikami, Bunzo; K., Yamauchi, Kosei; T., Ishimizu, Takeshi; S., Suzuki, Shiro
Enzymatic characterization and docking simulation of a xylan synthase catalytic subunit, Setaria viridis IRX10, using xylotrimer acceptors with distinct fluorescent labels
Plant Biotechnology
Y., Tashima, Yuko; Y., Tsukamoto, Yohei; N., Tsukamoto, Natsumi; Y., Kondo, Yuji; E., Uddin, Ehsan; W., Furukawa, Wakako; S., Go, Shiori; H., Arakawa, Hiromu; H., Kaji, Hiroyuki; H., Takeuchi, Hideyuki
Retention of DLK1 in the endoplasmic reticulum identifies roles for EGF-like-domain-specific O-glycans in the secretory pathway
FEBS Journal
S., Kimura, Seigo; K., Okada, Kana; N., Matsubara, Noriaki; F., Lyu, Fangjie; S., Tsutsumi, Susumu; Y., Kimura, Yasuaki; F., Hashiya, Fumitaka; M., Inagaki, Masahito; N., Abe, Naoko; H., Abe, Hiroshi
In vivo demonstration of enhanced mRNA delivery by cyclic disulfide-containing lipid nanoparticles for facilitating endosomal escape
RSC Medicinal Chemistry
K., Fukuchi, Kosuke; Y., Nakashima, Yuko; N., Abe, Naoko; S., Kimura, Seigo; F., Hashiya, Fumitaka; Y., Shichino, Yuichi; Y., Liu, Yiwei; R., Ogisu, Ryoko; S., Sugiyama, Satomi; D., Kawaguchi, Daisuke
Publisher Correction: Internal cap-initiated translation for efficient protein production from circular mRNA (Nature Biotechnology, (2025), 10.1038/s41587-025-02561-8)
Nature Biotechnology
Y., Umemura, Yuta; M., Islam, Majidul; R.Y., Hasi, Rumana Yesmin; T., Ishikawa, Toshiki; M., Nagano, Minoru; T., Oka, Takuji; N., Komura, Naoko; A., Imamura, Akihiro; H., Ishida, Hideharu; H., Ando, Hiromune
Chemical Synthesis and Structural Determination of the Inositol Glycan Head of Plant Sphingolipid GIPC in Brassicaceae
Chemistry – A European Journal
Haruhiko Fujihira; Hiroto Hirayama; Tadashi Suzuki
NGLY1 deficiency – clinical features and therapeutic strategy
Journal of Human Genetics
Y., Kondo, Yuji
Wnt Signaling Dysregulation by Function-disrupting N-Glycosylation
Trends in Glycoscience and Glycotechnology
H., Hanamatsu, Hisatoshi; G., Suda, Goki; M., Ohara, Masatsugu; M., Kurogochi, Masaki; N., Sakamoto, Naoya; J., Furukawa, Junichi
Novel glycan-related biomarker discovery by total glycomic and focused protein glycomic analyses
Journal of Human Genetics
A., Kuno, Atsushi; H., Sakaue, Hiroaki; S., Koizumi, Sachiko; A., Tomioka, Azusa; S., Mizukado, Saho; Y., Yamaguchi, Yuki; M., Fukuhara, Mitsuko; Y., Tsunaka, Yasuo; H., Kaji, Hiroyuki; S., Uchiyama, Susumu
Analytical dissection of minor glycoforms and glycoprotein associations in rAAV preparations by multimodal glycoproteomics
Analytical and Bioanalytical Chemistry
M., Horie, Masafumi; H., Takumida, Hiroshi; H., Koba, Hayato; T., Ueda, Tsukasa; H., Tanaka, Hidenori; M., Suzuki, Masami; Y., Ito, Yukinobu; A., Ito, Ayumi; M., Kondo, Mao; H.I., Suzuki, Hiroshi I.
Characteristic miRNA profiles represent clinicopathological diversity of small cell lung cancer
Journal of Pathology
H., Inaba, Hiroaki; H., Onoda, Hiroki; T., Uchihashi, Takayuki; A., Oshima, Atsunori; O., Shoji, Osami
Integration of Generative Protein Design with Synthetic Porphyrin Assembly: Metal-Responsive Cyclic Assembly of a Bi-Porphyrin Acquisition Designer Protein
Small
T.H., Chau, The Huong; N., Bansal, Naaz; A., Chernykh, Anastasia; R., Kawahara, Rebeca; M., Thaysen-Andersen, Morten
Glycomics-Guided Glycoproteomics Facilitates Comprehensive Profiling of the Glycoproteome in Complex Tumor Microenvironments
Journal of Visualized Experiments
M., Seida, Mayu; K., Ogami, Kouichi; S., Yoshino, Seiko; H.I., Suzuki, Hiroshi I.
Fine Regulation of MicroRNAs in Gene Regulatory Networks and Pathophysiology
International Journal of Molecular Sciences
T., Watanabe, Takashi; M., Nagai, Masayoshi; Y., Ishibashi, Yohei; M., Iwasaki, Mio; M., Mizoguchi, Masaki; M., Nagata, Masahiro; T., Imai, Takashi; K., Takato, Koichi; A., Imamura, Akihiro; Y., Kakuta, Yoshimitsu
Vacuolar sterol β-glucosidase EGCrP2/Sgl1 deficiency in Cryptococcus neoformans: Dysfunctional autophagy and Mincle-dependent immune activation as targets of novel antifungal strategies
PLOS Pathogens
H., Yamada, Hiroki; Y., Kimura, Yasuaki; H., Abe, Hiroshi; J., Yamamoto, Junichiro
Facile DNA chemical ligation under mild conditions enabled by 1-cyano-4-(dimethylamino)pyridinium tetrafluoroborate (CDAP)
Organic and Biomolecular Chemistry
M., Islam, Majidul; R.Y., Hasi, Rumana Yesmin; Y., Umemura, Yuta; H., Tanaka, Hidenori; Y., Kondo, Yudai; T., Ishikawa, Toshiki; M., Nagano, Minoru; H., Ali, Hanif; R., Kawakami, Ryushi; M., Aihara, Mutsumi
Method for isolation and quantification of inositol glycan produced by glycosylinositol phosphoceramide-hydrolysing phospholipase D in plants
Journal of Biochemistry
M., Hayashi, Masahiro; J., Yonetamari, Jun; Y., Muto, Yoshinori; K., Tanaka, Kaori
Complete genome sequence of Desulfovibrio sp. GTC20076 isolated from a clinical specimen in Japan
Microbiology Resource Announcements
S., Ohashi, Sana; S., Ishiguro, Sumie; T., Fukunaga, Tsukasa; A., Matsumoto, Akinobu; M., Hirata, Mina; M., Inagaki, Masahito; N., Abe, Naoko; F., Hashiya, Fumitaka; H., Abe, Hiroshi
Selection of Short 5′-UTR of Chemically Synthesized mRNA to Improve Translation Efficiency
Chemical and Pharmaceutical Bulletin
A., Nakano, Akiha; K., Uno, Kohei; Y., Matsui, Yusuke
Improved Prediction Accuracy for Late-Onset Preeclampsia Using cfRNA Profiles: A Comparative Study of Marker Selection Strategies
Healthcare (Switzerland)
K., Yamada, Keisuke; K., Suga, Kanta; N., Abe, Naoko; K., Hashimoto, Koji; S., Tsutsumi, Susumu; M., Inagaki, Masahito; F., Hashiya, Fumitaka; H., Abe, Hiroshi; M., Hamada, Michiaki
Multi-objective computational optimization of human 5′ UTR sequences
Briefings in Bioinformatics
M.M., Rahman, Md Matiur; H., Ishikawa, Hinata; M., Yamauchi, Marika; S., Takashima, Shigeo; Y.O., Kamatari, Yuji O.; K., Shimizu, Kaori; A., Okada, Ayaka; Y., Inoshima, Yasuo
Correction to: Characterization of mRNA Signature in Milk Small Extracellular Vesicles from Cattle Infected with Bovine Leukemia Virus (Pathogens, (2023), 12, 10, (1239), 10.3390/pathogens12101239)
Pathogens
https://doi.org/10.3390/pathogens14050434
Y., Noda, Yuhei; N., Kato, Noritoshi; F., Sato, Fuminori; Y., Suzuki, Yuji; S., Tsubota, Shoma; H., Kitai, Hiroki; S., Komatsu, Shintaro; A., Tanaka, Akihito; Y., Sato, Yuka; K., Maeda, Kayaho
Ameliorative Effect of an Anti-MicroRNA-21 Oligonucleotide on Animal and Human Models of Cystic Kidney Disease
Kidney360
T., Yamasaki, Takahiro; D., Kohda, Daisuke
An uncharacterized gene from the Actinobacillus genus encodes a glucosyltransferase with successive transfer activity and unique substrate specificity
Journal of Biological Chemistry
T.T., Lu, Tian Tian; S., Umeshita, Saori; K., Imanishi, Kae; Y., Wang, Yicheng; Y., Liu, Yishi; M., Nagae, Masamichi; Y., Senoo, Yuya; K., Ikeda, Kazutaka; M., Fujita, Morihisa; T., Kinoshita, Taroh
ARV1 is a component of the enzyme initiating glycosylphosphatidylinositol biosynthesis[Figure presented]
Journal of Biological Chemistry
M., Hayashi, Masahiro; J., Yonetamari, Jun; Y., Muto, Yoshinori; K., Tanaka, Kaori
Complete genome sequence of Psychrobacter sp. GTC18467 isolated from snake in Japan
Microbiology Resource Announcements
J., Yonetamari, Jun; M., Hayashi, Masahiro; Y., Muto, Yoshinori; K., Tanaka, Kaori
Complete genome sequence of Campylobacter sp. GTC17093 isolated from human skin infection
Microbiology Resource Announcements
K., Sakakibara, Kenji; K., Tanaka, Kenjiro; M., Iida, Madoka; Y., Imai, Yuta; M., Okada, Mai; K., Sahashi, Kentaro; T., Hirunagi, Tomoki; K., Maeda, Kentaro; R., Kato, Ryuji; M., Katsuno, Masahisa
Label-free morphology-based phenotypic analysis of spinal and bulbar muscular atrophy muscle cell models
DMM Disease Models and Mechanisms
T., Isogai, Tatsuki; K.M., Hirosawa, Kohichiro M.; M., Kanno, Miki; A., Sho, Ayano; R.S., Kasai, Rinshi S.; N., Komura, Naoko; H., Ando, Hiromune; K., Furukawa, Keiko; Y., Ohmi, Yuhsuke; K., Furukawa, Koichi
Extracellular vesicles adhere to cells primarily by interactions of integrins and GM1 with laminin
Journal of Cell Biology
S., Watanabe, S.; K., Yamanaka, Koji
Mitochondria and Endoplasmic Reticulum Contact Site as a Regulator of Proteostatic Stress Responses in Neurodegenerative Diseases
BioEssays
Y., Nakagawa, Yu; Y., Manabe, Yuka; W., Kondo, Wataru; T., Kondo, Tatsuhiko; K., Irie, Kazuhiro
3,4-Dihydroquinolizinium Ring, the Core Structure of Quinocidin, as a Cysteine-Selective Electrophile
ChemPlusChem
Y., Hanazono, Yuya; S., Yabuno, Saaya; T., Hayashi, Takahiro; N., Numoto, Nobutaka; Y.O., Kamatari, Yuji O.; N., Ito, Nobutoshi; M., Oda, Masayuki
Crystal structures reveal how the multispecific antibody G2 achieves binding to different peptides
FEBS Letters
K.F., Aoki-Kinoshita, Kiyoko Flora; S., Goto, Susumu
Meeting Report on the 1st Asia & Pacific Bioinformatics Joint Conference (APBJC 2024)
Genes to Cells
E., Salim, Emil; H., Ilmi, Hilkatul; T.S., Wahyuni, Tutik Sri; A., Widyawaruyanti, Aty; N., Oka, Natsuhisa
Nucleotide-hydroxychloroquine conjugates: Cutting-edge strategy for novel antimalarial and antiviral agents
Chemistry Letters
K., Kawaguchi, Ken; L.B.T., Nguyen, Le Bui Thao; M., Kinoshita, Mao; N., Abe, Naoko; M., Oba, Makoto; H., Abe, Hiroshi; K., Sudo, Kazuki; K., Inoue, Keita; S., Uchida, Satoshi; T., Sawa, Teiji
Highly pure mRNA vaccine provides robust immunization against P. aeruginosa by minimizing type I interferon responses
Journal of Controlled Release
R., Fujimoto, Ryutaro; S.L., Higashi, Sayuri L.; Y., Shintani, Yuki; K.M., Hirosawa, Kohichiro M.; K.G., Suzuki, Kenichi G.N.; M., Ikeda, Masato
Oxidation-responsive coacervates composed of oligo(ethylene glycol) bearing benzyl sulfide groups
Polymer Journal
A., Alborzian Deh Sheikh, Amin; W., Long, Wang; N., Matsubara, Naoko; T., Futamura, Takeshi; A., Imamura, Akihiro; H., Ando, Hiromune; S., Ohno, Shiho; H.H., Abdu-Allah, Hajjaj H.M.; H., Takematsu, Hiromu; M., Asano, Masatake
Analysis of CD22 cis-ligands using a synthetic sialoside binding to CD22 with ultra-high affinity
Carbohydrate Research
Y., Umemura, Yuta; T., Udagawa, Taro; N., Komura, Naoko; A., Imamura, Akihiro; H., Ishida, Hideharu; H., Ando, Hiromune; H., Tanaka, Hidenori
4,6-O-Phenylboronic Ester Protection for 1,2-cis-α-Selective Glucosylation
Asian Journal of Organic Chemistry
S.L., Higashi, Sayuri L.; F., Nakagawa, Fumiko; M., Ikeda, Masato
Development of glyco-materials based on glucose derivatives through aqueous self-assembly
Chemistry Letters
H., Kodama, Hayata; H., Iijima, Hirotaka; Y., Matsui, Yusuke
Systematic identification of exercise-induced anti-aging processes involving intron retention
Journals of Gerontology – Series A Biological Sciences and Medical Sciences
H., Yagi, Hirokazu; S., Kondo, Sachiko; R., Murakami, Reiko; R., Yogo, Rina; S., Yanaka, Saeko; F., Umezawa, Fumiko; M., Yagi-Utsumi, Maho; A., Fujita, Akihiro; M., Okina, Masako; Y., Hashimoto, Yutaka
Temporal and Sex-Dependent N-Glycosylation Dynamics in Rat Serum
International Journal of Molecular Sciences
E., Suzuki, Emi; M., Serata, Masaki; T., Sako, Tomoyuki; S., Sato, Sumie; T., Iino, Tohru; H., Tateno, Hiroaki; J., Hirabayashi, Jun
Glycophenotyping of mutants of Lacticaseibacillus paracasei by lectin microarray
Applied and Environmental Microbiology
Y., Yanagi, Yasuo; H., Ichikawa, Hinako; L.B.T., Nguyen, Le Bui Thao; A., Hayashi, Akimasa; N., Abe, Naoko; H., Abe, Hiroshi; S., Uchida, Satoshi
mRNA vaccination mitigates pathological retinochoroidal neovascularization in animal models
Vaccine
E., Salim, Emil; H., Ilmi, Hilkatul; A., Widyawaruyanti, Aty; N., Oka, Natsuhisa
Design and synthesis of hydroxychloroquine-sugar conjugates as promising antimalarial agents
Bioorganic and Medicinal Chemistry Letters
H., Kawade, Haruka; W., Bao, Wanxue; Y., Tokoro, Yuko; Y., Ito, Yoshimasa; Y., Tsuji, Yudai; K., Takahashi, Kazuo; K., Nakajima, Kazuki; M., Nakano, Miyako; Y., Kizuka, Yasuhiko
Bisecting GlcNAc modification of angiotensin-related glycoproteins in mouse kidney
Journal of Biochemistry
H., Takumida, Hiroshi; A., Saito, Akira; Y., Okabe, Yugo; Y., Terasaki, Yasuhiro; Y., Mikami, Yu; H., Tanaka, Hidenori; M., Suzuki, Masami; Y., Hamaguchi, Yu; C., Zeng, Chao; M., Hamada, Michiaki
Integrative epigenome and transcriptome analyses reveal transcriptional programs differentially regulated by ASCL1 and NEUROD1 in small cell lung cancer
Oncogene
https://doi.org/10.1038/s41388-025-03481-2
S., Armiento, Samantha; F., Oglio, Franca; A., Masino, Antonio; A., Iovine, Andrea; X., Trivelli, Xavier; A., Molinaro, Antonio; Y., Guerardel, Yann; R., Berni Canani, Roberto; C., De Castro, Cristina
The glycocalyx of Lacticaseibacillus paracasei NPB01 presents two different rhamnose-rich polysaccharides with non-equivalent immunomodulating activities
Carbohydrate Polymers
https://doi.org/10.1016/j.carbpol.2025.123742
M., Yoshimura, Mana; Y., Sugahara, Yoshiki; K., Nagase, Kana; M., Kobayashi, Miho; Y.O., Kamatari, Yuji O.; K., Yamauchi, Kosei
Protein-tannins binding mode in hydrolyzable tannins-induced protein aggregation
Food Chemistry
A., Kitani, Akihiro; Y., Matsui, Yusuke
Integrative network analysis reveals novel moderators of Aβ-Tau interaction in Alzheimer’s disease
Alzheimer’s Research and Therapy
L.D., Leclercq, Louis David; V., Le Moigne, Vincent; W., Daher, Wassim; M.A.M., Cortès, Mélanie A.M.; A.J., Viljoen, Albertus J.; Y., Tasrini, Yara; X., Trivelli, Xavier; H., Lavanant, Hélène; I., Schmitz, Isabelle; N.F., Durand, Nicolas F.
A glycosylated lipooctapeptide promotes uptake and growth of Mycobacterium abscessus in the host
Nature Communications
https://doi.org/10.1038/s41467-025-58455-5
S., Kimura, Shinya; K., Adachi, Kurea; Y., Ishii, Yoshiki; T., Komiyama, Tomoki; T., Saito, Takuho; N., Nakayama, Naofumi; M., Yokoya, Masashi; H., Takaya, Hikaru; S., Yagai, Shiki; S., Kawai, Shinnosuke
Molecular-level insights into the supramolecular gelation mechanism of urea derivative
Nature Communications
K., Maekawa, Kasumi; A., Sobue, Akira; O., Komine, Okiru; Y., Saito, Yuko; S., Murayama, Shigeo; T.C., Saido, Takaomi Comings; T., Saito, Takashi; K., Yamanaka, Koji
Long-term systemic androgen deprivation partially modulates neuroinflammation in male AppNL−G−F/NL−G−F mice
Scientific Reports
M., Hane, Masaya; A., Naramura, Ayane; K., Hayakawa, Kaito; C., Abe, Chikara; T., Nakagawa, Takahiro; I., Kushima, Itaru; S., Furukawa, Soma; Y., Fukami, Yuki; K., Ikegami, Keisuke; K., Saigoh, Kazumasa
A highly sensitive quantitative method of polysialic acid reveals its unique changes in brain aging and neuropsychiatric disorders
Scientific Reports
M., Kirii, Mami; Y., Yoshida, Yui; S., Takashima, Shigeo; K., Uchio-Yamada, Kozue; K., Oh-Hashi, Kentaro
Transcriptional regulation of solute carrier family 6 member 9 gene
Molecular Biology Reports
K., Maekawa, Kasumi; A., Sobue, Akira; O., Komine, Okiru; Y., Saito, Yuko; S., Murayama, Shigeo; T.C., Saido, Takaomi Comings; T., Saito, Takashi; K., Yamanaka, Koji
Correction to: Long-term systemic androgen deprivation partially modulates neuroinflammation in male AppNL−G−F/NL−G−F mice (Scientific Reports, (2025), 15, 1, (14702), 10.1038/s41598-025-98825-z)
Scientific Reports
J., Fujita, Junso; K., Kasai, Kazuki; K., Hibino, Kota; G., Kagoshima, Gota; N., Kamimura, Natsuki; S., Tobita, Shungo; Y., Kato, Yuki; R., Uehara, Ryo; K., Namba, Keiichi; T., Uchihashi, Takayuki
Structural basis for the interaction between the bacterial cell division proteins FtsZ and ZapA
Nature Communications
H., Yokoe, Hayato; K., Kokubo, Kengo; K., Yamaoka, Kazuki; R., Oikawa, Ryota; F., Tomoike, Fumiaki; N., Abe, Naoko; Y., Kimura, Yasuaki; H., Abe, Hiroshi
Chemical autoligation with phosphorothioate- and sulfonamide-terminated DNA via intramolecular cross-activation
Communications Chemistry
Roux N.; Delannoy C.; Yu S.-Y.; Miura S.; Carlu L.; Besseau L.; Nakagawa T.; Sato C.; Kitajima K.; Guerardel Y.; Laudet V.
Anemonefish use sialic acid metabolism as Trojan horse to avoid giant sea anemone stinging
BMC Biology
Sakurai A.; Egashira K.; Kizaki R.; Sholihah I.A.; Koyama H.; Takashima S.; Kamatari Y.O.; Batubara I.; Iswantini D.; Wijaya C.H.; Ana I.D.; Barlian A.; Hirata Y.; Furuta K.; Takemori H.
Extracellular Vesicle-Like Nanoparticles, Artificially Created by Heat Treatment of Euglena gracilis, Exhibit Autofluorescence and Suppress IL-6 Expression in RAW264.7 Cells
BioNanoScience
Ohno S.; Ogura C.; Yabuki A.; Itoh K.; Manabe N.; Angata K.; Togayachi A.; Aoki-Kinoshita K.; Furukawa J.-I.; Inamori K.-I.; Inokuchi J.-I.; Kaname T.; Nishihara S.; Yamaguchi Y.
VarMeter2: An enhanced structure-based method for predicting pathogenic missense variants through Mahalanobis distance
Computational and Structural Biotechnology Journal
Kushima I.; Nakatochi M.; Ozaki N.
Copy Number Variations and Human Well-Being: Integrating Psychiatric, Physical, and Socioeconomic Perspectives
Biological Psychiatry
Shintani Y.; Higashi S.L.; Shibata A.; Hirosawa K.M.; Suzuki K.G.N.; Kawano S.-I.; Katagiri H.; Ikeda M.
Modulable Supramolecular Hydrogels via Co-Assembly Using Cyclic Dipeptides: Influence of One Methyl Group
Chemistry of Materials
Yamashita K.; Ito A.; Ishida M.; Shintani Y.; Ikeda M.; Hadano S.; Izumi M.; Ochi R.
Stereoisomerism-dependent gelation and crystal structures of glycosylated N-methylbromomaleimide-based supramolecular hydrogels
Soft Matter
Kizuka Y.
The last piece in fucosylation: Glycobiology
Nature Chemical Biology
Dessenne C.; Mariller C.; Vidal O.; Huvent I.; Guerardel Y.; Elass-Rochard E.; Rossez Y.
Glycan-mediated adhesion mechanisms in antibiotic-resistant bacteria
BBA Advances
Kaji H.
Current issues of tandem mass spectrum (MS2)-based glycoproteomics and efforts to complement them
BBA Advances
https://doi.org/10.1016/j.bbadva.2025.100158
Lee S.; Ono T.; Masaaki S.; Fujita A.; Matsubara M.; Zappa A.; Yamada I.; Aoki-Kinoshita K.F.
Updates implemented in version 4 of the GlyCosmos Glycoscience Portal
Analytical and Bioanalytical Chemistry
Hosono Y.; Tomiyasu N.; Kasai H.; Ishikawa E.; Takahashi M.; Imamura A.; Ishida H.; Compostella F.; Kida H.; Kumanogoh A.; Bamba T.; Izumi Y.; Yamasaki S.
Identification of α-galactosylceramide as an endogenous mammalian antigen for iNKT cells
Journal of Experimental Medicine
Iwata-Endo K.; Sahashi K.; Kawai K.; Fujioka Y.; Okada Y.; Watanabe E.; Iwade N.; Ishibashi M.; Mohammad M.; Aldoghachi A.F.; Tuerde D.; Fujiwara T.; Hirai S.; Okado H.; Katsuno M.; Watanabe H.; Kanamitsu K.; Neya M.; Ishigaki S.; Sobue G.
Correcting tau isoform ratios with a long-acting antisense oligonucleotide alleviates 4R-tauopathy phenotypes
Molecular Therapy Nucleic Acids
https://doi.org/10.1016/j.omtn.2025.102503
Kurogochi M.; Suzuki C.; Hanamatsu H.; Furukawa J.-I.
Advances in total glycomic analysis including sialylated sub-glycan isomers by SALSA method
BBA Advances
Huang C.; Honda A.; Suzuki T.
Free oligosaccharides in serum
BBA Advances
Tanaka-Okamoto M.; Hanzawa K.; Yamamoto T.; Michida T.; Ikezawa K.; Ohkawa K.; Nishino K.; Yokota T.; Maeda M.; Yoshida K.-I.; Takenaka S.; Ohue M.; Yamasaki T.; Miyamoto Y.
Combination of urinary free-glycan markers for the diagnosis of various malignant tumors
Scientific Reports
Suzuki K.; Wu D.; Kitajima K.; Yamakawa N.; Omoto T.; Hane M.; Sato C.
Development of a permethylation-based detection method for oligo/polysialic acid structures via tandem MALDI-TOF mass spectrometry
BBA Advances
Takahashi M.; Komura N.; Tanaka H.-N.; Imamura A.; Ishida H.; Ando H.
Ganglioside analog synthesis via late-stage sialylation and fatty acid introduction
Carbohydrate Research
Kobayashi D.; Hiono T.; Arakawa H.; Kaji H.; Ohkawara A.; Ichikawa T.; Ban H.; Isoda N.; Sakoda Y.
Deglycosylation and truncation in the neuraminidase stalk are functionally equivalent in enhancing the pathogenicity of a high pathogenicity avian influenza virus in chickens
Journal of Virology
Hayashi M.; Yonetamari J.; Muto Y.; Tanaka K.
Complete genome sequence of Parvimonas parva: first isolate of a human clinical specimen from Japan
Microbiology Resource Announcements
Torpy H.; Chau T.H.; Chatterjee S.; Chernykh A.; Torpy D.J.; Meyer E.J.; Thaysen-Andersen M.
Impact of different pathogen classes on the serum N-glycome in septic shock
BBA Advances
Sakuma K.; Chikenji G.; Ota M.
Statistical Analysis of Walker-A Motif-Containing β-α-β Supersecondary Structures in the Protein Data Bank
Methods in Molecular Biology
Usui K.; Yamamoto H.; Mori H.; Fujita Y.
Extracellular Vesicle-Mediated Secretion of Chlorophyll Biosynthetic Intermediates in the Cyanobacterium Leptolyngbya boryana
Plant & cell physiology
https://doi.org/10.1093/pcp/pcae095
Honda A.; Seino J.; Huang C.; Nakano M.; Suzuki T.
Occurrence of free glycans in salmonid serum
Biochemical and Biophysical Research Communications
Higashi S.L.; Ikeda M.
Coacervates Composed of Low-Molecular-Weight Compounds– Molecular Design, Stimuli Responsiveness, Confined Reaction
Advanced Biology
Iijima H.; Ambrosio F.; Matsui Y.
Network-based systematic dissection of exercise-induced inhibition of myosteatosis in older individuals
Journal of Physiology
Uehara Y.; Matsumoto A.; Nakazawa T.; Fukuta A.; Ando K.; Uchiumi T.; Oka N.; Ito K.
Binding mode between peptidyl-tRNA hydrolase and the peptidyl-A76 moiety of the substrate
Journal of Biological Chemistry
Kawahara R.; Kautto L.; Bansal N.; Dipta P.; Chau T.H.; Liquet-Weiland B.; Ahn S.B.; Thaysen-Andersen M.
HEXB Drives Raised Paucimannosylation in Colorectal Cancer and Stratifies Patient Risk
Molecular and Cellular Proteomics
Sato S.; Iwaki J.; Hirabayashi J.
Decoding the multifaceted roles of galectins in self-defense
Seminars in Immunology
Hamaguchi T.; Ohara M.; Hisatomi A.; Sekiguchi K.; Takeda J.-I.; Ueyama J.; Ito M.; Nishiwaki H.; Ogi T.; Hirayama M.; Ohkuma M.; Sakamoto M.; Ohno K.
Desulfovibrio falkowii sp. nov., Porphyromonas miyakawae sp. nov., Mediterraneibacter flintii sp. nov. and Owariibacterium komagatae gen. nov., sp. nov., isolated from human faeces
International Journal of Systematic and Evolutionary Microbiology
Lee J.H.; Sumer-Bayraktar Z.; Mittal P.; Donnellan L.; Young C.; Rushworth R.L.; Lewis J.G.; Nenke M.; Rankin W.; Kingler-Hoffmann M.; Hoffmann P.; Thaysen-Andersen M.; Torpy D.J.; Meyer E.J.
Mass spectrometric detection of neutrophil elastase cleaved corticosteroid binding globulin and its association with Asn347 site glycosylation, in septic shock patients
Clinica Chimica Acta
Otsubo K.; Kageyama K.; Masuya H.; Kato S.; Suga H.; Hieno A.
Two new species of Elongisporangium recovered from forest environments in Japan
Mycological Progress
Nakakita S.-I.; Hirabayashi J.
Transforming monosaccharides: Recent advances in rare sugar production and future exploration
BBA Advances
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Uptake of small extracellular vesicles by recipient cells is facilitated by paracrine adhesion signaling
Nature Communications
Ahsan N.; Hayashi M.; Otsubo K.; Hieno A.; Suga H.; Kageyama K.
First report of torenia root rot caused by oomycete species
Journal of General Plant Pathology
Chernykh A.; Sumer-Bayraktar Z.; Lee J.H.; Meyer E.J.; Torpy D.J.; Thaysen-Andersen M.
RCL glycosylation of serum corticosteroid-binding globulin: implications in cortisol delivery and septic shock
Glycobiology
https://doi.org/10.1093/glycob/cwaf013
Meng Z.; Nakashima Y.; Inagaki M.; Li Z.; Acharyya S.; Hashiya F.; Abe N.; Kimura Y.; Abe H.
Synthesis of hydrophobic-tagged 2′-deoxy-modified cap analogs and its effect on mRNA translation
Bulletin of the Chemical Society of Japan
Le Y.H.; Hoang H.T.T.; Khong D.T.; Nguyen T.N.; Que T.A.; Pham D.T.; Tanaka K.; Yamamoto Y.
Contamination of retail market meat with extended-spectrum beta-lactamase genes in Vietnam
International Journal of Food Microbiology
Hanamatsu H.; Suda G.; Ohara M.; Ogawa K.; Tamaki N.; Hikita H.; Haga H.; Maekawa S.; Sugiyama M.; Kakisaka T.; Nakai M.; Sho T.; Miura N.; Kurosaki M.; Asahina Y.; Taketomi A.; Ueno Y.; Takehara T.; Nishikaze T.; Furukawa J.-I.; Sakamoto N.
Elevated A2F bisect N-glycans of serum IgA reflect progression of liver fibrosis in patients with MASLD
Journal of Gastroenterology
Shimizu N.; Mashimo Y.; Yokouchi H.; Nishio Y.; Sawai S.; Ichikawa T.; Ogi T.; Baba T.; Onouchi Y.
Novel FBN1 intron variant causes isolated ectopia lentis via in-frame exon skipping
Journal of Human Genetics
Bennett A.R.; Lundstrøm J.; Chatterjee S.; Thaysen-Andersen M.; Bojar D.
Compositional data analysis enables statistical rigor in comparative glycomics
Nature Communications
Groux-Degroote S.; Martin K.; Yakayama N.; Coddeville B.; Guérardel Y.; Sackstein R.
Ganglioside expression delineates human mesenchymal stem/stromal cell populations derived from different tissue sources
Cytotherapy
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Bridge protein-mediated viral targeting of cells expressing endogenous μ-opioid G protein-coupled receptors in the mouse and monkey brain
Neuroscience Research
Bienes K.M.; Yokoi A.; Kitagawa M.; Kajiyama H.; Andersen M.-T.; Kawahara R.
Extracellular vesicles display distinct glycosignatures in high-grade serous ovarian carcinoma
BBA Advances
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Maintenance of the Golgi ribbon structure by the KASH protein Jaw1
Journal of Biochemistry
Fukuchi K.; Nakashima Y.; Abe N.; Kimura S.; Hashiya F.; Shichino Y.; Liu Y.; Ogisu R.; Sugiyama S.; Kawaguchi D.; Inagaki M.; Meng Z.; Kajihara S.; Tada M.; Uchida S.; Li T.-T.; Maity R.; Kawasaki T.; Kimura Y.; Iwasaki S.; Abe H.
Internal cap-initiated translation for efficient protein production from circular mRNA
Nature Biotechnology
Jamil S.N.H.; Salim E.; Oka N.; Lam S.D.; Feroz S.R.; Ali A.H.; Latip J.
Bioactive glycosides: insights into antimalarial advances
Chemistry Letters
Hayashi M.; Yonetamari J.; Muto Y.; Niwa H.; Tanaka K.
Complete genome sequence of Prevotella spp. GTC17253 isolated from equine in Japan
Microbiology Resource Announcements
Fuma K.; Iitani Y.; Imai K.; Ushida T.; Tano S.; Yoshida K.; Yokoi A.; Miki R.; Kidokoro H.; Sato Y.; Hara Y.; Ogi T.; Nomaki K.; Tsuda M.; Komine O.; Yamanaka K.; Kajiyama H.; Kotani T.
Prenatal inflammation impairs early CD11c-positive microglia induction and delays myelination in neurodevelopmental disorders
Communications Biology
https://doi.org/10.1038/s42003-025-07511-3
Wu D.
Oncofetal Chondroitin Sulfate-specific Antibodies for Cancer Therapy
Trends in Glycoscience and Glycotechnology
Hirata Y.; Nagase H.; Satoh K.; Takemori H.; Furuta K.; Kamatari Y.O.
Antiferroptotic properties of allicin and related organosulfur compounds—diallyl disulfide and diallyl trisulfide—from Garlic
Food and Chemical Toxicology
https://doi.org/10.1016/j.fct.2024.115124
Ren W.-W.; Kawahara R.; Suzuki K.G.N.; Dipta P.; Yang G.; Thaysen-Andersen M.; Fujita M.
MYO18B promotes lysosomal exocytosis by facilitating focal adhesion maturation
The Journal of cell biology
https://doi.org/10.1083/jcb.202407068
Yoshida M.; Katada H.; Isozumi Y.; Suzuki C.; Yoshimi A.; Ozaki N.; Noda Y.
Involvement of N-methyl-D-aspartate receptor GluN2C/GluN2D subunits in social behavior impairments in mice exposed to social defeat stress as juveniles
Journal of Pharmacological Sciences
Furukawa S.; Fukami Y.; Hanamatsu H.; Yokota I.; Furukawa J.-I.; Hane M.; Kitajima K.; Sato C.; Hiraga K.; Satake Y.; Yagi S.; Koike H.; Katsuno M.
Serum glycobiomarkers for chronic inflammatory demyelinating polyneuropathy
European Journal of Neurology
https://doi.org/10.1111/ene.70023
Kanaoka Y.; Mori T.; Nagaike W.; Itaya S.; Nonaka Y.; Kohga H.; Haruyama T.; Sugano Y.; Miyazaki R.; Ichikawa M.; Uchihashi T.; Tsukazaki T.
AFM observation of protein translocation mediated by one unit of SecYEG-SecA complex
Nature communications
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Hamasaki M.; Onodera T.; Furukawa J.; Todoh M.; Sakai Y.; Ebata T.; Terkawi M.A.; Homan K.; Iwasaki N.
Intra-Articular Administration of Ganglioside Sugars Protects Cartilage from Progressive Degeneration in an Instability OA Rabbit Model
Cartilage
https://doi.org/10.1177/19476035241311542
Davis J.L.; Norwood J.S.; Smith R.E.; O’Dea F.; Chellappa K.; Rowe M.L.; Williamson M.P.; Stafford G.P.; Vinogradov E.; Maes E.; Guérardel Y.; Mesnage S.
Corrigendum to “Dissecting the Enterococcal Polysaccharide Antigen (EPA) structure to explore innate immune evasion and phage specificity” [Carbohydr. Polym. 347 (1 January 2025) 122686](S0144861724009123)(10.1016/j.carbpol.2024.122686)
Carbohydrate Polymers
https://doi.org/10.1016/j.carbpol.2024.122983
Bao W.; Yamasaki T.; Nakano M.; Nagae M.; Kizuka Y.
Functions of unique middle loop and C-terminal tail in GnT-III activity and secretion
Biochimica et Biophysica Acta – General Subjects
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O-GlcNAc glycans in the mammalian extracellular environment
Carbohydrate Research
https://doi.org/10.1016/j.carres.2025.109378
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Dissecting the Enterococcal Polysaccharide Antigen (EPA) structure to explore innate immune evasion and phage specificity
Carbohydrate Polymers
Suzuki S.; Tanaka K.; Kamegawa A.; Nishikawa K.; Suzuki H.; Oshima A.; Fujiyoshi Y.
Structural insights into the engagement of lysophosphatidic acid receptor 1 with different G proteins
Journal of Structural Biology
https://doi.org/10.1016/j.jsb.2024.108164
2024年
Tang Y.-H.; Liu Y.-S.; Fujita M.
Production of Domain 9 from the cation-independent mannose-6-phosphate receptor fused with an Fc domain
Glycoconjugate Journal
Chen J.; Wen P.; Tang Y.-H.; Li H.; Wang Z.; Wang X.; Zhou X.; Gao X.-D.; Fujita M.; Yang G.
Proteome and Glycoproteome Analyses Reveal Regulation of Protein Glycosylation Site-Specific Occupancy and Lysosomal Hydrolase Maturation by N-Glycan-Dependent ER-Quality Control
Journal of Proteome Research
Kondo H.
Innate Immune Sensing of Lysosomal Dysfunction Drives Multiple Lysosomal Storage Disorders
Trends in Glycoscience and Glycotechnology
https://doi.org/10.4052/tigg.2411.6J
Liu Y.-S.; Miao Y.-L.; Dou Y.; Yang Z.-H.; Sun W.; Zhou X.; Li Z.; Hideki N.; Gao X.-D.; Fujita M.
Processing of N-glycans in the ER and Golgi influences the production of surface sialylated glycoRNA
Glycoconjugate Journal
Miura K.; Yoshida M.; Morita K.; Fujimoto M.; Yasuda Y.; Yamamori H.; Takahashi J.; Miyata S.; Okazaki K.; Matsumoto J.; Toyomaki A.; Makinodan M.; Hashimoto N.; Onitsuka T.; Kasai K.; Ozaki N.; Hashimoto R.
Gaze behaviors during free viewing revealed differences in visual salience processing across four major psychiatric disorders: a mega-analysis study of 1012 individuals
Molecular Psychiatry
Yamada H.; Iwai H.; Hashiya F.; Kimura Y.; Abe H.; Yamamoto J.
Concise Affinity-Based Purification of Ligated mRNA for Structure-Activity Relationship Studies of Nucleosugar Modification Patterns
ChemBioChem
Nagai-Okatani C.; Tominaga D.; Tomioka A.; Sakaue H.; Goda N.; Ko S.; Kuno A.; Kaji H.
GRable Version 1.0: A Software Tool for Site-Specific Glycoform Analysis With Improved MS1-Based Glycopeptide Detection With Parallel Clustering and Confidence Evaluation With MS2 Information
Molecular and Cellular Proteomics
https://doi.org/10.1016/j.mcpro.2024.100833
Inagaki M.; Nohara M.; Kobayashi C.; Fukuoka M.; Xijier; Matsumura K.; Ohashi K.; Enomoto H.; Yabe T.; Kanamaru Y.
Two major bovine milk whey proteins induce distinct responses in IEC-6 intestinal cells
Journal of Dairy Research
Yu M.; Yuliana R.; Tumewu S.A.; Bao W.; Suga H.; Shimizu M.
Efficacy of L-arabinose in managing cucumber Fusarium wilt and the underlying mechanism of action
Pest Management Science
https://doi.org/10.1002/ps.8523
Nagai-Okatani C.; Tomioka A.; Tominaga D.; Sakaue H.; Kuno A.; Kaji H.
Inter-tissue glycan heterogeneity: site-specific glycoform analysis of mouse tissue N-glycoproteomes using MS1-based glycopeptide detection method assisted by lectin microarray
Analytical and Bioanalytical Chemistry
Inamori K.-I.; Nakamura K.; Shishido F.; Hsu J.-C.; Nagafuku M.; Nitta T.; Ikeda J.; Yoshimura H.; Kodaira M.; Tsuchida N.; Matsumoto N.; Uemura S.; Ohno S.; Manabe N.; Yamaguchi Y.; Togayachi A.; Aoki-Kinoshita K.F.; Nishihara S.; Furukawa J.-I.; Kaname T.; Nakamura M.; Shimohata T.; Tadaka S.; Shirota M.; Kinoshita K.; Nakamura Y.; Ohno I.; Sekijima Y.; Inokuchi J.-I.
Functional evaluation of novel variants of B4GALNT1 in a patient with hereditary spastic paraplegia and the general population
Frontiers in Neuroscience
Tang Y.-H.; Liu Y.-S.; Fujita M.
Correction: Production of Domain 9 from the cation-independent mannose-6-phosphate receptor fused with an Fc domain (Glycoconjugate Journal, (2024), 10.1007/s10719-024-10169-4)
Glycoconjugate Journal
Homan K.; Tokuhiro T.; Onodera T.; Hanamatsu H.; Furukawa J.-I.; Ebata T.; Matsuoka M.; Kadoya K.; Terkawi M.A.; Iwasaki N.
Associations between glycan signature alterations and the cellular antigenic properties of passaged chondrocytes
Frontiers in Immunology
Hanzawa K.
Mucinase for Targeting Cancer Cells
Trends in Glycoscience and Glycotechnology
Iltis C.; Moskalevska I.; Debiesse A.; Seguin L.; Fissoun C.; Cervera L.; Moudombi L.; Ardin M.; Ferrari A.; Eliott C.; Pisani D.; Ottaviani A.; Bourinet M.; Luci C.; Gual P.; Makulyte G.; Bernard D.; Durandy M.; Duret L.C.; Hamidouche T.; Kunz S.; Croce O.; Delannoy C.; Guérardel Y.; Allain F.; Hofman P.; Benarroch-Popivker D.; Bianchini L.; Dadone-Montaudie B.; Cosson E.; Guglielmi J.; Pourcher T.; Braud V.M.; Shkreli M.; Pers Y.-M.; Jorgensen C.; Brondello J.-M.; Féral C.C.; Michallet M.-C.; Gilson E.; Cherfils-Vicini J.
A ganglioside-based immune checkpoint enables senescent cells to evade immunosurveillance during aging
Nature Aging
Sugiura S.; Higashi S.L.; Shintani Y.; Shibata A.; Hirosawa K.M.; Suzuki K.G.N.; Ikeda M.
9-Fluorenylmethoxycarbonyl (Fmoc)-modified taurine as a hydrogelator bearing sulfonate group
Chemistry Letters
Retnosari R.; Abdul Ghani M.A.; Majed Alkharji M.; Wan Nawi W.N.I.S.; Ahmad Rushdan A.S.; Mahadi M.K.; Ugusman A.; Oka N.; Zainalabidin S.; Latip J.
The Protective Effects of Carvacrol Against Doxorubicin-Induced Cardiotoxicity In Vitro and In Vivo
Cardiovascular Toxicology
Nakazawa Y.; Oka Y.; Matsunaga T.; Ogi T.
Transcription-coupled repair – mechanisms of action, regulation, and associated human disorders
FEBS Letters
Kong W.-Z.; Fujita M.
GlycoMaple: recent updates and applications in visualization and analysis of glycosylation pathways
Analytical and Bioanalytical Chemistry
Yamada K.; Asada K.; Hanzawa K.; Aoki Y.; Nakajima K.; Kinoshita M.
Developing Method for Minor Acidic O-Glycan Analysis in Mucin and Cancer Cell Samples
Journal of Proteome Research
Ozaki T.; Sugie T.; Suzuki Y.; Uchimura K.; Suzui M.; Sakamoto K.; Shirane M.; Kadomatsu K.
Systemic administrations of protamine heal subacute spinal cord injury in mice.
Neuroscience Research
Suzuki S.; Mashiko T.; Tsukamoto Y.; Oya M.; Kotani Y.; Okawara S.; Matsumoto T.; Mizue Y.; Takeuchi H.; Okajima T.; Itoh M.
The N-acetylglucosaminyltransferase Radical fringe contributes to defects in JAG1-dependent turnover and signaling of NOTCH3 CADASIL mutants
Journal of Biological Chemistry
Mizumoto S.; Matsumoto K.; Tokoro Y.; Komura N.; Nakajima K.; Ando H.; Yamada S.; Kizuka Y.
Inhibition of cell growth and glycosaminoglycan biosynthesis by xylose analog 2-Az-Xyl
Biochemical and Biophysical Research Communications
Miura A.; Manabe Y.; Suzuki K.G.N.; Shomura H.; Okamura S.; Shirakawa A.; Yano K.; Miyake S.; Mayusumi K.; Lin C.-C.; Morimoto K.; Ishitobi J.; Nakase I.; Arai K.; Kobayashi S.; Ishikawa U.; Kanoh H.; Miyoshi E.; Yamaji T.; Kabayama K.; Fukase K.
De Novo Glycan Display on Cell Surfaces Using HaloTag: Visualizing the Effect of the Galectin Lattice on the Lateral Diffusion and Extracellular Vesicle Loading of Glycosylated Membrane Proteins
Journal of the American Chemical Society
https://doi.org/10.1021/jacs.4c02040
Zhang Q.; Fujita M.
Why nature evolved GPI-anchored proteins: unique structure characteristics enable versatile cell surface functions
Glycobiology
https://doi.org/10.1093/glycob/cwae089
Aoki-Kinoshita K.F.; Akune-Taylor Y.; Ando H.; Angata K.; Fujita M.; Furukawa J.-I.; Kaji H.; Kato K.; Kitajima K.; Kizuka Y.; Matsui Y.; Nakajima K.; Nishihara S.; Okajima T.; Sakamoto K.; Sato C.; Thaysen-Andersen M.; Togayachi A.; Yagi H.; Zappa A.; Kadomatsu K.
The Human Glycome Atlas project for cataloging all glycan-related omics data in human
Glycobiology
https://doi.org/10.1093/glycob/cwae052
Osada N.; Nagae M.; Yamasaki T.; Harduin-Lepers A.; Kizuka Y.
Regulation of human GnT-IV family activity by the lectin domain
Carbohydrate Research
Nozaki S.; Hijioka M.; Wen X.; Iwashita N.; Namba J.; Nomura Y.; Nakanishi A.; Kitazawa S.; Honda R.; Kamatari Y.O.; Kitahara R.; Suzuki K.; Inden M.; Kitamura Y.
Galantamine suppresses α-synuclein aggregation by inducing autophagy via the activation of α7 nicotinic acetylcholine receptors
Journal of Pharmacological Sciences
Lyu F.; Hakariya H.; Hiraoka H.; Li Z.; Matsubara N.; Soo Y.; Hashiya F.; Abe N.; Shu Z.; Nakamoto K.; Kimura Y.; Abe H.
Intracellular Delivery of Antisense Oligonucleotides by Tri-Branched Cyclic Disulfide Units
ChemMedChem
Ter Z.Y.; Chang L.S.; Zaini N.A.M.; Fazry S.; Babji A.S.; Koketsu M.; Takashima S.; Kamal N.; Lim S.J.
Untargeted metabolomics profiling for revealing water-soluble bioactive components and biological activities in edible bird’s nest
Food Research Internationa
Ali O.; Okumura B.; Shintani Y.; Sugiura S.; Shibata A.; Higashi S.L.; Ikeda M.
Oxidation-Responsive Supramolecular Hydrogels Based on Glucosamine Derivatives with an Aryl Sulfide Group
ChemBioChem
Muto Y.; Tanaka K.
Comparative Evolutionary Genomics Reveals Genetic Diversity and Differentiation in Bacteroides fragilis
Genes
Isogai T.; Hirosawa K.M.; Suzuki K.G.N.
Recent Advancements in Imaging Techniques for Individual Extracellular Vesicles
Molecules
Osada N.; Mishra S.K.; Nakano M.; Tokoro Y.; Nagae M.; Doerksen R.J.; Kizuka Y.
Self-regulation of MGAT4A and MGAT4B activity toward glycoproteins through interaction of lectin domain with their own N-glycans
iScience
Miyake N.; Tsurusaki Y.; Fukai R.; Kushima I.; Okamoto N.; Ohashi K.; Nakamura K.; Hashimoto R.; Hiraki Y.; Son S.; Kato M.; Sakai Y.; Osaka H.; Deguchi K.; Matsuishi T.; Takeshita S.; Fattal-Valevski A.; Ekhilevitch N.; Tohyama J.; Yap P.; Keng W.T.; Kobayashi H.; Takubo K.; Okada T.; Saitoh S.; Yasuda Y.; Murai T.; Nakamura K.; Ohga S.; Matsumoto A.; Inoue K.; Saikusa T.; Hershkovitz T.; Kobayashi Y.; Morikawa M.; Ito A.; Hara T.; Uno Y.; Seiwa C.; Ishizuka K.; Shirahata E.; Fujita A.; Koshimizu E.; Miyatake S.; Takata A.; Mizuguchi T.; Ozaki N.; Matsumoto N.
Molecular diagnosis of 405 individuals with autism spectrum disorder
European Journal of Human Genetics
Matsumoto K.; Ikliptikawati D.K.; Makiyama K.; Mochizuki K.; Tobita M.; Kobayashi I.; Voon D.C.-C.; Lim K.; Ogawa K.; Kashiwakura I.; Suzuki H.I.; Yoshino H.; Wong R.W.; Hazawa M.
Phase-separated super-enhancers confer an innate radioresistance on genomic DNA
Journal of Radiation Research
Horiuchi M.; Watanabe S.; Komine O.; Takahashi E.; Kaneko K.; Itohara S.; Shimada M.; Ogi T.; Yamanaka K.
ALS-linked mutant TDP-43 in oligodendrocytes induces oligodendrocyte damage and exacerbates motor dysfunction in mice
Acta Neuropathologica Communications
Sriwilaijaroen N.; Hanamatsu H.; Yokota I.; Nishikaze T.; Ijichi T.; Takahashi T.; Sakoda Y.; Furukawa J.-I.; Suzuki Y.
Edible bird’s nest: N- and O-glycan analysis and synergistic anti-avian influenza virus activity with neuraminidase inhibitors
Antiviral Research
Retnosari R.; Oh-hashi K.; Ugusman A.; Zainalabidin S.; Latip J.; Oka N.
Carvacrol-conjugated 3-Hydroxybenzoic Acids: Design, Synthesis, cardioprotective potential against doxorubicin-induced Cardiotoxicity, and ADMET study
Bioorganic and Medicinal Chemistry Letters
Masuda R.; Gotoh S.; Ben Othman S.; Kitaguchi K.; Yabe T.
Partial efficacy of Yuzu (Citrus junos) pectin side chains in elongating the jejunal villus in protein-deficient malnourished mice
Journal of Functional Foods
Yagi H.; Yamada R.; Saito T.; Honda R.; Nakano R.; Inutsuka K.; Tateo S.; Kusano H.; Nishimura K.; Yanaka S.; Tojima T.; Nakano A.; Furukawa J.-I.; Yagi-Utsumi M.; Adachi S.; Kato K.
Molecular tag for promoting N-glycan maturation in the cargo receptor-mediated secretion pathway
iScience
Goodson H.; Kawahara R.; Fehring J.; Purcell A.W.; Croft N.P.; Thaysen-Andersen M.
α-Mannosylated HLA-II glycopeptide antigens dominate the immunopeptidome of immortalised cells and tumour tissues
Glycobiology
Ninagawa S.; Matsuo M.; Ying D.; Oshita S.; Aso S.; Matsushita K.; Taniguchi M.; Fueki A.; Yamashiro M.; Sugasawa K.; Saito S.; Imami K.; Kizuka Y.; Sakuma T.; Yamamoto T.; Yagi H.; Kato K.; Mori K.
UGGT1-mediated reglucosylation of N-glycan competes with ER-associated degradation of unstable and misfolded glycoproteins
eLife
Okamoto T.; Nakashima F.; Shibata T.; Mori D.
Seabuckthorn (Hippophae rhamnoides, L.) pulp oil prevents ultraviolet-induced damage in human fibroblasts
Bioscience, Biotechnology and Biochemistry
Hayashi M.; Niwa A.; Yonetamari J.; Muto Y.; Yokoyama S.; Nakamura M.; Yokobori Y.; Ogawa M.; Ichioka R.; Kikuchi R.; Okura H.; Ogura S.; Tetsuka N.; Baba H.; Tanaka K.
Complete genome sequence of Pigmentibacter ruber isolated from a human patient in Japan
Microbiology Resource Announcements
Yagi-Utsumi M.; Kanaoka Y.; Miyajima S.; Itoh S.G.; Yanagisawa K.; Okumura H.; Uchihashi T.; Kato K.
Single-Molecule Kinetic Observation of Antibody Interactions with Growing Amyloid β Fibrils
Journal of the American Chemical Society
Hosokawa Y.; Matsuoka M.; Sakai Y.; Fukuda R.; Matsugasaki K.; Homan K.; Furukawa J.-I.; Onodera T.; Iwasaki N.
Depletion of b-series ganglioside prevents limb length discrepancy after growth plate injury
BMC Musculoskeletal Disorders
Gunji D.; Abe Y.; Muraoka S.; Narumi R.; Isoyama J.; Ikemoto N.; Ishida M.; Shinkura A.; Tomonaga T.; Nagayama S.; Takahashi Y.; Fukunaga Y.; Sakai Y.; Obama K.; Adachi J.
Longitudinal phosphoproteomics reveals the PI3K-PAK1 axis as a potential target for recurrent colorectal liver metastases
Cell Reports
Lillehoj E.P.; Yu Y.; Verceles A.C.; Imamura A.; Ishida H.; Piepenbrink K.H.; Goldblum S.E.
Stenotrophomonas maltophilia provokes NEU1-mediated release of a flagellin-binding decoy receptor that protects against lethal infection
iScience
Zhang R.; Farshadyeganeh P.; Ohkawara B.; Nakajima K.; Takeda J.-I.; Ito M.; Zhang S.; Miyasaka Y.; Ohno T.; Mori-Yoshimura M.; Masuda A.; Ohno K.
Muscle-specific lack of Gfpt1 triggers ER stress to alleviate misfolded protein accumulation
DMM Disease Models and Mechanisms
Shoji H.; Hirano H.; Nojima Y.; Gunji D.; Shinkura A.; Muraoka S.; Abe Y.; Narumi R.; Nagao C.; Aoki M.; Obama K.; Honda K.; Mizuguchi K.; Tomonaga T.; Saito Y.; Yoshikawa T.; Kato K.; Boku N.; Adachi J.
Phosphoproteomic subtyping of gastric cancer reveals dynamic transformation with chemotherapy and guides targeted cancer treatment
Cell Reports
https://doi.org/10.1016/j.celrep.2024.114774
Sugiura S.; Ikeda M.
Supramolecular materials constructed from synthetic glycopeptides via aqueous self-assembly and their bioapplications in immunotherapy
Organic and Biomolecular Chemistry
Mori T.; Niki T.; Uchida Y.; Mukai K.; Kuchitsu Y.; Kishimoto T.; Sakai S.; Makino A.; Kobayashi T.; Arai H.; Yokota Y.; Taguchi T.; Suzuki K.G.N.
A non-toxic equinatoxin-II reveals the dynamics and distribution of sphingomyelin in the cytosolic leaflet of the plasma membrane
Scientific Reports
Okumura B.; Yamaguchi E.; Komura N.; Ohtomi T.; Kawano S.-I.; Sato H.; Katagiri H.; Ando H.; Ikeda M.
Photodegradable glyco-microfibers fabricated by the self-assembly of cellobiose derivatives bearing nitrobenzyl groups
Communications Materials
Nomura K.; An S.; Kobayashi Y.; Kondo J.; Shi T.; Murase H.; Nakamoto K.; Kimura Y.; Abe N.; Ui-Tei K.; Abe H.
Synthesis of 2′-formamidonucleoside phosphoramidites for suppressing the seed-based off-target effects of siRNAs
Nucleic Acids Research
Shinjo K.; Umehara T.; Niwa H.; Sato S.; Katsushima K.; Sato S.; Wang X.; Murofushi Y.; Suzuki M.M.; Koyama H.; Kondo Y.
Novel pharmacologic inhibition of lysine-specific demethylase 1 as a potential therapeutic for glioblastoma
Cancer Gene Therapy
Akune-Taylor Y.; Kon A.; Aoki-Kinoshita K.F.
In silico simulation of glycosylation and related pathways
Analytical and Bioanalytical Chemistry
Akatsu C.; Naito-Matsui Y.; Abdu-Allah H.H.M.; Imamura A.; Long W.; Ishida H.; Takematsu H.; Tsubata T.
Neu5Gc-mediated high-affinity interaction is dispensable for CD22 cis-ligands to regulate B cell signaling
Journal of Biological Chemistry
Osuka R.F.; Yamasaki T.; Kizuka Y.
Structure and function of N-acetylglucosaminyltransferase V (GnT-V)
Biochimica et Biophysica Acta – General Subjects
Dessenne C.; Ménart B.; Acket S.; Dewulf G.; Guerardel Y.; Vidal O.; Rossez Y.
Lipidomic analyses reveal distinctive variations in homeoviscous adaptation among clinical strains of Acinetobacter baumannii, providing insights from an environmental adaptation perspective
Microbiology Spectrum
Aguilera-Correa J.J.; Wei F.; Leclercq L.-D.; Tasrini Y.; Mullapudi E.; Daher W.; Nakajima K.; Canaan S.; Herrmann J.-L.; Wilmanns M.; Guérardel Y.; Wen L.; Kremer L.
A dTDP-L-rhamnose 4-epimerase required for glycopeptidolipid biosynthesis in Mycobacterium abscessus
Journal of Biological Chemistry
Marsh D.T.; Shibuta M.; Kato R.; Smid S.D.
Medicinal cannabis extracts are neuroprotective against Aβ1–42-mediated toxicity in vitro
Basic and Clinical Pharmacology and Toxicology
Sobue A.; Komine O.; Endo F.; Kakimi C.; Miyoshi Y.; Kawade N.; Watanabe S.; Saito Y.; Murayama S.; Saido T.C.; Saito T.; Yamanaka K.
Microglial cannabinoid receptor type II stimulation improves cognitive impairment and neuroinflammation in Alzheimer’s disease mice by controlling astrocyte activation
Cell Death and Disease
Okumura H.; Hayashi Y.; Arioka Y.; Kushima I.; Mori D.; Ozaki N.
Generation of induced pluripotent stem cells from a schizophrenia patient with heterozygous 1q21.1 deletion
Stem Cell Research
Matsumoto M.; Matsushita K.; Hane M.; Wen C.; Kurematsu C.; Ota H.; Bang Nguyen H.; Quynh Thai T.; Herranz-Pérez V.; Sawada M.; Fujimoto K.; García-Verdugo J.M.; Kimura K.D.; Seki T.; Sato C.; Ohno N.; Sawamoto K.
Neuraminidase inhibition promotes the collective migration of neurons and recovery of brain function
EMBO Molecular Medicine
https://doi.org/10.1038/s44321-024-00073-7
Hayashi M.; Yonetamari J.; Muto Y.; Tanaka K.
Complete genome sequence of Peptostreptococcus porci isolated from porcine endocarditis in Japan
Microbiology Resource Announcements
Tokoro Y.; Nagae M.; Nakano M.; Harduin-Lepers A.; Kizuka Y.
LacdiNAc synthase B4GALNT3 has a unique PA14 domain and suppresses N-glycan capping
Journal of Biological Chemistry
Hayashi Y.; Okumura H.; Arioka Y.; Kushima I.; Mori D.; Lo T.; Otgonbayar G.; Kato H.; Nawa Y.; Kimura H.; Aleksic B.; Ozaki N.
Analysis of human neuronal cells carrying ASTN2 deletion associated with psychiatric disorders
Translational Psychiatry
https://doi.org/10.1038/s41398-024-02962-4
Kusumi A.; Tsunoyama T.A.; Suzuki K.G.N.; Fujiwara T.K.; Aladag A.
Transient, nano-scale, liquid-like molecular assemblies coming of age
Current Opinion in Cell Biology
Hirata Y.; Takemori H.; Furuta K.; Kamatari Y.O.; Sawada M.
Ferroptosis induces nucleolar stress as revealed by live-cell imaging using thioflavin T
Current Research in Pharmacology and Drug Discovery
Nakayama A.; Watanabe M.; Yamashiro R.; Kuroyanagi H.; Matsuyama H.J.; Oshima A.; Mori I.; Nakano S.
A hyperpolarizing neuron recruits undocked innexin hemichannels to transmit neural information in Caenorhabditis elegans
Proceedings of the National Academy of Sciences of the United States of America
Iwata M.; Kawabata R.; Morimoto N.; Takeuchi R.F.; Sakaguchi T.; Irie T.; Osakada F.
Evolutionary engineering and characterization of Sendai virus mutants capable of persistent infection and autonomous production
Frontiers in Virology
Fujioka Y.; Kawai K.; Endo K.; Ishibashi M.; Iwade N.; Tuerde D.; Kaibuchi K.; Yamashita T.; Yamanaka A.; Katsuno M.; Watanabe H.; Sobue G.; Ishigaki S.
Stress-impaired reward pathway promotes distinct feeding behavior patterns
Frontiers in Neuroscience
Harada A.; Kunii M.; Kurokawa K.; Sumi T.; Kanda S.; Zhang Y.; Nadanaka S.; Hirosawa K.M.; Tokunaga K.; Tojima T.; Taniguchi M.; Moriwaki K.; Yoshimura S.-I.; Yamamoto-Hino M.; Goto S.; Katagiri T.; Kume S.; Hayashi-Nishino M.; Nakano M.; Miyoshi E.; Suzuki K.G.N.; Kitagawa H.; Nakano A.
Dynamic movement of the Golgi unit and its glycosylation enzyme zones
Nature Communications
Fujita S.; Sugio Y.; Kawamura T.; Yamagami R.; Oka N.; Hirata A.; Yokogawa T.; Hori H.
ArcS from Thermococcus kodakarensis transfers L-lysine to preQ0 nucleoside derivatives as minimum substrate RNAs
Journal of Biological Chemistry
Hanamatsu H.; Yokota I.; Kurogochi M.; Akasaka-Manya K.; Miura N.; Manya H.; Endo T.; Nishikaze T.; Furukawa J.-I.; Tanaka K.
Direct derivatization of sialic acids and mild β-elimination for linkage-specific sialyl O-glycan analysis
Analytica Chimica Acta
Fabiano M.; Oikawa N.; Kerksiek A.; Furukawa J.-I.; Yagi H.; Kato K.; Schweizer U.; Annaert W.; Kang J.; Shen J.; Lütjohann D.; Walter J.
Presenilin Deficiency Results in Cellular Cholesterol Accumulation by Impairment of Protein Glycosylation and NPC1 Function
International Journal of Molecular Sciences
Yanaka S.; Kodama A.; Nishiguchi S.; Fujita R.; Shen J.; Boonsri P.; Sung D.; Isono Y.; Yagi H.; Miyanoiri Y.; Uchihashi T.; Kato K.
Identification of potential C1-binding sites in the immunoglobulin CL domains
International Immunology
https://doi.org/10.1093/intimm/dxae017
Imaeda M.; Tanaka S.; Oya-Ito T.; Uematsu M.; Fujigaki H.; Saito K.; Ando M.; Ozaki N.
Secondary carnitine deficiency during refeeding in severely malnourished patients with eating disorders: a retrospective cohort study
Journal of Eating Disorders
Kikuchi H.; Hieno A.; Suga H.; Masuya H.; Uematsu S.; Kageyama K.
New species Pythium amaminum sp. nov. isolated from river water on Amami Island in Japan
Mycoscience
https://doi.org/10.47371/MYCOSCI.2024.02.004
Hashimoto Y.; Kawade H.; Bao W.; Morii S.; Nakano M.; Nagae M.; Murakami R.; Tokoro Y.; Nakashima M.; Cai Z.; Isaji T.; Gu J.; Nakajima K.; Kizuka Y.
The K346T mutant of GnT-III bearing weak in vitro and potent intracellular activity
Biochimica et Biophysica Acta – General Subjects
Yoshida Y.; Niimi Y.; Fushihara D.; Katakura H.; Fukui R.; Murase H.; Tomoike F.; Hashiya F.; Murakami T.; Kodama E.N.; Suzuki T.; Yasukawa K.; Kimura Y.; Abe H.
2′-β-Methylselenyl nucleos(t)ide analogs as reverse transcriptase inhibitors against diverse HIV mutants
Bioorganic and Medicinal Chemistry
Kizuka Y.
Regulation of intracellular activity of N-glycan branching enzymes in mammals
Journal of Biological Chemistry
https://doi.org/10.1016/j.jbc.2024.107471
Noda N.; Nomura K.; Takahashi N.; Hashiya F.; Abe H.; Matsuura T.
Slow Freeze-Thaw Cycles Enhanced Hybridization of Kilobase DNA with Long Complementary Sticky Ends
ChemSystemsChem
Hagino R.; Kuwabara R.; Komura N.; Imamura A.; Ishida H.; Ando H.; Tanaka H.-N.
Protecting-Group-Free Synthesis of ADP-Ribose and Dinucleoside Di-/Triphosphate Derivatives via P(V)-P(V) Coupling Reaction
Chemistry – A European Journal
https://doi.org/10.1002/chem.202401302
Watanabe S.; Amporndanai K.; Awais R.; Latham C.; Awais M.; O’Neill P.M.; Yamanaka K.; Hasnain S.S.
Ebselen analogues delay disease onset and its course in fALS by on-target SOD-1 engagement
Scientific Reports
https://doi.org/10.1038/s41598-024-62903-5
Mori D.; Inami C.; Ikeda R.; Sawahata M.; Urata S.; Yamaguchi S.T.; Kobayashi Y.; Fujita K.; Arioka Y.; Okumura H.; Kushima I.; Kodama A.; Suzuki T.; Hirao T.; Yoshimi A.; Sobue A.; Ito T.; Noda Y.; Mizoguchi H.; Nagai T.; Kaibuchi K.; Okabe S.; Nishiguchi K.; Kume K.; Yamada K.; Ozaki N.
Mice with deficiency in Pcdh15, a gene associated with bipolar disorders, exhibit significantly elevated diurnal amplitudes of locomotion and body temperature
Translational Psychiatry
https://doi.org/10.1038/s41398-024-02952-6
Retnosari R.; Ali A.H.; Zainalabidin S.; Ugusman A.; Oka N.; Latip J.
The recent discovery of a promising pharmacological scaffold derived from carvacrol: A review
Bioorganic and Medicinal Chemistry Letters
https://doi.org/10.1016/j.bmcl.2024.129826
Ghose A.; Nuzelu V.; Gupta D.; Kimoto H.; Takashima S.; Harlin E.W.; SS S.; Ueda H.; Koketsu M.; Rangan L.; Mitra S.
Micropollutants (ciprofloxacin and norfloxacin) remediation from wastewater through laccase derived from spent mushroom waste: Fate, toxicity, and degradation
Journal of Environmental Management
https://doi.org/10.1016/j.jenvman.2024.121857
Tang Y.-H.; Leng J.-X.; Yang G.; Gao X.-D.; Liu Y.-S.; Fujita M.
Production of CA125 with Tn antigens using a glycosylphosphatidylinositol anchoring system
Journal of Biochemistry
https://doi.org/10.1093/jb/mvae019
Sei H.; Hirade N.; Kamiya K.; Nakashima F.; Yoshitake J.; Kano K.; Mishiro-Sato E.; Kikuchi R.; Uchida K.; Shibata T.
Isocitrate dehydrogenase 1 upregulation in urinary extracellular vesicles from proximal tubules of type 2 diabetic rats
FASEB Journal
https://doi.org/10.1096/fj.202400371R
Masuda R.; Ohira N.; Kitaguchi K.; Yabe T.
Novel role of homogalacturonan region of pectin in disrupting the interaction between fibronectin and integrin β1
Carbohydrate Polymers
Oka Y.; Nakazawa Y.; Shimada M.; Ogi T.
Endogenous aldehyde-induced DNA–protein crosslinks are resolved by transcription-coupled repair
Nature Cell Biology
Tomida S.; Nagae M.; Kizuka Y.
Corrigendum to “Distinctive domains and activity regulation of core fucosylation enzyme FUT8” [BBA General Subjects 1868 (2024)/130561] (BBA – General Subjects (2024) 1868(4), (S0304416524000047), (10.1016/j.bbagen.2024.130561))
Biochimica et Biophysica Acta – General Subjects
https://doi.org/10.1016/j.bbagen.2024.130615
Mukoyama N.; Nishio N.; Kimura H.; Tokura T.; Kishi S.; Ogasawara K.; Tsuzuki H.; Yokoi S.; Wada A.; Shigeyama M.; Ozaki N.; Fujimoto Y.; Sone M.
Anxiety, depression and quality of life in patients with head and neck cancer undergoing laryngectomy: A long-term prospective evaluation
International Journal of Language and Communication Disorders
https://doi.org/10.1111/1460-6984.13036
Yamaguchi Y.; Ishii K.; Koizumi S.; Sakaue H.; Maruno T.; Fukuhara M.; Shibuya R.; Tsunaka Y.; Matsushita A.; Bandoh K.; Torisu T.; Murata-Kishimoto C.; Tomioka A.; Mizukado S.; Kaji H.; Kashiwakura Y.; Ohmori T.; Kuno A.; Uchiyama S.
Glycosylation of recombinant adeno-associated virus serotype 6
Molecular Therapy Methods and Clinical Development
Nakagawa Y.; Fujii M.; Ito N.; Ojika M.; Akase D.; Aida M.; Kinoshita T.; Sakurai Y.; Yasuda J.; Igarashi Y.; Ito Y.
Molecular basis of N-glycan recognition by pradimicin a and its potential as a SARS-CoV-2 entry inhibitor
Bioorganic and Medicinal Chemistry
Oishi M.; Shinjo K.; Takanari K.; Muraoka A.; Suzuki M.M.; Kanbe M.; Higuchi S.; Ebisawa K.; Hashikawa K.; Kamei Y.; Kondo Y.
Exclusive expression of KANK4 promotes myofibroblast mobility in keloid tissues
Scientific Reports
Sonobe R.; Yang P.; Suzuki M.M.; Shinjo K.; Iijima K.; Nishiyama N.; Miyata K.; Kataoka K.; Kajiyama H.; Kondo Y.
Long noncoding RNA TUG1 promotes cisplatin resistance in ovarian cancer via upregulation of DNA polymerase eta
Cancer Science
Hagino R.; Komura N.; Imamura A.; Ishida H.; Ando H.; Tanaka H.-N.
Direct and Stereoselective Protecting-Group-Free N-ADP-Ribosylation through Traceless Staudinger Ligation
European Journal of Organic Chemistry
https://doi.org/10.1002/ejoc.202400251
Uchihashi T.; Nishizawa Y.
Application of high-speed atomic force microscopy in visualizing the dynamics of synthetic polymers
Japanese Journal of Applied Physics
Shiina T.; Suzuki Y.; Horii K.; Sawamura T.; Yuki N.; Horii Y.; Shimizu Y.
Purinergic inhibitory regulation of esophageal smooth muscle is mediated by P2Y receptors and ATP-dependent potassium channels in rats
The journal of physiological sciences : JPS
https://doi.org/10.1186/s12576-024-00916-5
Lee C.-H.; Saw J.-E.; Chen E.H.-L.; Wang C.-H.; Uchihashi T.; Chen R.P.-Y.
The Positively Charged Cluster in the N-terminal Disordered Region may Affect Prion Protein Misfolding: Cryo-EM Structure of Hamster PrP(23–144) Fibrils
Journal of Molecular Biology
https://doi.org/10.1016/j.jmb.2024.168576
Uno K.; Tsukioka K.; Sakata H.; Inoue-Hirakawa T.; Matsui Y.
Evaluating Desk-Assisted Standing Techniques for Simulated Pregnant Conditions: An Experimental Study Using a Maternity-Simulation Jacket
Healthcare (Switzerland)
Kondo Y.; Li Y.; Okajima T.
Efficient Escorting Strategy for Aggregation-Prone Notch EGF Repeats with Sparcl1
Molecules
https://doi.org/10.3390/molecules29051031
Nomura K.; Onda K.; Murase H.; Hashiya F.; Ono Y.; Terai G.; Oka N.; Asai K.; Suzuki D.; Takahashi N.; Hiraoka H.; Inagaki M.; Kimura Y.; Shimizu Y.; Abe N.; Abe H.
Development of PCR primers enabling the design of flexible sticky ends for efficient concatenation of long DNA fragments
RSC Chemical Biology
https://doi.org/10.1039/d3cb00212h
Mannen K.; Nagata T.; Rozenberg A.; Konno M.; del Carmen Marín M.; Bagherzadeh R.; Béjà O.; Uchihashi T.; Inoue K.
Multiple Roles of a Conserved Glutamate Residue for Unique Biophysical Properties in a New Group of Microbial Rhodopsins Homologous to TAT Rhodopsin
Journal of Molecular Biology
https://doi.org/10.1016/j.jmb.2023.168331
Liu Y.; Li R.; Zhang Y.; Jiao S.; Xu T.; Zhou Y.; Wang Y.; Wei J.; Du W.; Fujita M.; Du Y.; Wang Z.A.
Unveiling the inverse antimicrobial impact of a hetero-chitooligosaccharide on Candida tropicalis growth and biofilm formation
Carbohydrate Polymers
https://doi.org/10.1016/j.carbpol.2024.121999
Mori D.; Ikeda R.; Sawahata M.; Yamaguchi S.; Kodama A.; Hirao T.; Arioka Y.; Okumura H.; Inami C.; Suzuki T.; Hayashi Y.; Kato H.; Nawa Y.; Miyata S.; Kimura H.; Kushima I.; Aleksic B.; Mizoguchi H.; Nagai T.; Nakazawa T.; Hashimoto R.; Kaibuchi K.; Kume K.; Yamada K.; Ozaki N.
Phenotypes for general behavior, activity, and body temperature in 3q29 deletion model mice
Translational Psychiatry
https://doi.org/10.1038/s41398-023-02679-w
Kondo Y.; Jing W.; Xia L.
Site-1 Protease Deficiency Causes Human Skeletal Dysplasia
Trends in Glycoscience and Glycotechnology
https://doi.org/10.4052/tigg.2309.1E
Mubuchi A.; Takechi M.; Nishio S.; Matsuda T.; Itoh Y.; Sato C.; Kitajima K.; Kitagawa H.; Miyata S.
Assembly of neuron- and radial glial-cell-derived extracellular matrix molecules promotes radial migration of developing cortical neurons
eLife
https://doi.org/10.7554/eLife.92342
Homan K.; Onodera T.; Hanamatsu H.; Furukawa J.-I.; Momma D.; Matsuoka M.; Iwasaki N.
Articular cartilage corefucosylation regulates tissue resilience in osteoarthritis
eLife
https://doi.org/10.7554/eLife.92275
Kaminogo K.; Yamaguchi S.; Tokura T.; Kimura H.; Kishi S.; Ichimura N.; Yamamoto N.; Ohara G.; Chen H.; Ozaki N.; Ikeda M.; Hibi H.
Predictors of anxiety and depression in patients with oral cancer undergoing radical resection with reconstructive surgery
Oral Oncology Reports
https://doi.org/10.1016/j.oor.2024.100295
Funahashi R.; Matsuura F.; Ninomiya M.; Okabe S.; Takashima S.; Tanaka K.; Nishina A.; Koketsu M.
Hybrid pharmacophore design and synthesis of donepezil-inspired aurone derivative salts as multifunctional acetylcholinesterase inhibitors
Bioorganic Chemistry
https://doi.org/10.1016/j.bioorg.2024.107229
Kaido M.; Yasuda M.; Hayashi M.; Ohashi H.; Ohta H.; Akai Y.; Tanaka K.; Deguchi T.
The performance of a Fully Automated Urine Particle Analyzer, Sysmex UF-5000, in detecting fastidious bacteria in urine samples
Journal of Microbiological Methods
https://doi.org/10.1016/j.mimet.2024.106913
Huang L.; Kondo Y.; Cao L.; Han J.; Li T.; Zuo B.; Yang F.; Li Y.; Ma Z.; Bai X.; Jiang M.; Ruan C.; Xia L.
Novel GNE missense variants impair de novo sialylation and cause defective angiogenesis in the developing brain in mice
Blood Advances
https://doi.org/10.1182/bloodadvances.2023011490
Wang B.; Wang Y.; Zhou X.; Gao X.-D.; Fujita M.; Li Z.
Highly efficient expression of Rasamsonia emersonii lipase in Pichia pastoris: characterization and gastrointestinal simulated digestion in vitro
Journal of the Science of Food and Agriculture
https://doi.org/10.1002/jsfa.13390
Sakuma K.; Koike R.; Ota M.
Dual-wield NTPases: A novel protein family mined from AlphaFold DB
Protein Science
https://doi.org/10.1002/pro.4934
Lo T.; Kushima I.; Kimura H.; Aleksic B.; Okada T.; Kato H.; Inada T.; Nawa Y.; Torii Y.; Yamamoto M.; Kimura R.; Funabiki Y.; Kosaka H.; Numata S.; Kasai K.; Sasaki T.; Yokoyama S.; Munesue T.; Hashimoto R.; Yasuda Y.; Fujimoto M.; Usami M.; Itokawa M.; Arai M.; Ohi K.; Someya T.; Watanabe Y.; Egawa J.; Takahashi T.; Suzuki M.; Yamasue H.; Iwata N.; Ikeda M.; Ozaki N.
Association between copy number variations in parkin (PRKN) and schizophrenia and autism spectrum disorder: A case–control study
Neuropsychopharmacology Reports
https://doi.org/10.1002/npr2.12370
Tsukamoto Y.; Tsukamoto N.; Saiki W.; Tashima Y.; Furukawa J.-I.; Kizuka Y.; Narimatsu Y.; Clausen H.; Takeuchi H.; Okajima T.
Characterization of galactosyltransferase and sialyltransferase genes mediating the elongation of the extracellular O-GlcNAc glycans
Biochemical and Biophysical Research Communications
Huang C.; Seino J.; Honda A.; Fujihira H.; Wu D.; Okahara K.; Kitazume S.; Nakaya S.; Kitajima K.; Sato C.; Suzuki T.
Rat hepatocytes secrete free oligosaccharides
Journal of Biological Chemistry
https://doi.org/10.1016/j.jbc.2024.105712
Yosilia R.; Feng W.; Hieno A.; Otsubo K.; Kusunoki M.; Suga H.; Kageyama K.
First report of crown rot on lettuce caused by Phytophthora crassamura in Japan
Journal of General Plant Pathology
https://doi.org/10.1007/s10327-023-01163-z
Tomida S.; Nagae M.; Kizuka Y.
Distinctive domains and activity regulation of core fucosylation enzyme FUT8
Biochimica et Biophysica Acta – General Subjects
https://doi.org/10.1016/j.bbagen.2024.130561
Ohashi S.; Nakamura M.; Acharyya S.; Inagaki M.; Abe N.; Kimura Y.; Hashiya F.; Abe H.
Development and Comparison of 4-Thiouridine to Cytidine Base Conversion Reaction
ACS Omega
https://doi.org/10.1021/acsomega.3c08516
Shintani Y.; Katagiri H.; Ikeda M.
Oxidation-Responsive Supramolecular Hydrogel Based on a Simple Fmoc-Cysteine Derivative Capable of Showing Autonomous Gel–Sol–Gel Transitions
Advanced Functional Materials
https://doi.org/10.1002/adfm.202312999
dos Santos-Donado P.R.; Donado-Pestana C.M.; Rondán-Sanabria G.G.; Pauletti B.A.; Kawahara R.; Palmisano G.; Finardi-Filho F.
Two-dimensional gel and shotgun proteomics approaches for the comparative evaluation of genetically modified maize
Journal of Food Measurement and Characterization
https://doi.org/10.1007/s11694-024-02397-x
Wang T.; Sobue A.; Watanabe S.; Komine O.; Saido T.C.; Saito T.; Yamanaka K.
Dimethyl fumarate improves cognitive impairment and neuroinflammation in mice with Alzheimer’s disease
Journal of Neuroinflammation
https://doi.org/10.1186/s12974-024-03046-2
Marsh D.T.; Sugiyama A.; Imai Y.; Kato R.; Smid S.D.
The structurally diverse phytocannabinoids cannabichromene, cannabigerol and cannabinol significantly inhibit amyloid β-evoked neurotoxicity and changes in cell morphology in PC12 cells
Basic and Clinical Pharmacology and Toxicology
https://doi.org/10.1111/bcpt.13943
Iijima H.; Zhang F.; Ambrosio F.; Matsui Y.
Network-based cytokine inference implicates Oncostatin M as a driver of an inflammation phenotype in knee osteoarthritis
Aging Cell
https://doi.org/10.1111/acel.14043
Houlahan C.B.; Kong Y.; Johnston B.; Cielesh M.; Chau T.H.; Fenwick J.; Coleman P.R.; Hao H.; Haltiwanger R.S.; Thaysen-Andersen M.; Passam F.H.; Larance M.
Analysis of the Healthy Platelet Proteome Identifies a New Form of Domain-Specific O-Fucosylation
Molecular & cellular proteomics : MCP
https://doi.org/10.1016/j.mcpro.2024.100717
Melo-Braga M.N.; Carvalho M.B.; Ferreira M.C.E.; Lavinder J.; Abbasi A.; Palmisano G.; Thaysen-Andersen M.; Sajadi M.M.; Ippolito G.C.; Felicori L.F.
Unveiling the multifaceted landscape of N-glycosylation in antibody variable domains: Insights and implications
International Journal of Biological Macromolecules
Hatanaka R.; Hane M.; Hayakawa K.; Morishita S.; Ohno S.; Yamaguchi Y.; Wu D.; Kitajima K.; Sato C.
Identification of a buried β-strand as a novel disease-related motif in the human polysialyltransferases
Journal of Biological Chemistry
https://doi.org/10.1016/j.jbc.2023.105564
Kawade N.; Yamanaka K.
Novel insights into brain lipid metabolism in Alzheimer’s disease: Oligodendrocytes and white matter abnormalities
FEBS Open Bio
Enokido T.; Horie M.; Yoshino S.; Suzuki H.I.; Matsuki R.; Brunnstrom H.; Micke P.; Nagase T.; Saito A.; Miyashita N.
Distinct microRNA Signature and Suppression of ZFP36L1 Define ASCL1-Positive Lung Adenocarcinoma
Molecular Cancer Research
https://doi.org/10.1158/1541-7786.MCR-23-0229
Chernykh A.; Abrahams J.L.; Grant O.C.; Kambanis L.; Sumer-Bayraktar Z.; Ugonotti J.; Kawahara R.; Corcilius L.; Payne R.J.; Woods R.J.; Thaysen-Andersen M.
Position-specific N- and O-glycosylation of the reactive center loop impacts neutrophil elastase–mediated proteolysis of corticosteroid-binding globulin
Journal of Biological Chemistry
Hane M.
Direct Observation Method for Glycans at Single-Molecule Level
Trends in Glycoscience and Glycotechnology
Kemmoku H.; Takahashi K.; Mukai K.; Mori T.; Hirosawa K.M.; Kiku F.; Uchida Y.; Kuchitsu Y.; Nishioka Y.; Sawa M.; Kishimoto T.; Tanaka K.; Yokota Y.; Arai H.; Suzuki K.G.N.; Taguchi T.
Single-molecule localization microscopy reveals STING clustering at the trans-Golgi network through palmitoylation-dependent accumulation of cholesterol
Nature Communications
https://doi.org/10.1038/s41467-023-44317-5
Arafuka S.; Fujishiro H.; Torii Y.; Sekiguchi H.; Habuchi C.; Miwa A.; Yoshida M.; Iritani S.; Iwasaki Y.; Ikeda M.; Ozaki N.
Neuropathological substrate of incident dementia in older patients with schizophrenia: A clinicopathological study
Psychiatry and Clinical Neurosciences
Sugiura S.; Shintani Y.; Higashi S.L.; Shibata A.; Ikeda M.
Dihydrolevoglucosenone (Cyrene) as a Biobased Green Alternative to Organic Solvents for the Preparation of Supramolecular Gels Consisting of Self-Assembling Dipeptide Derivatives
ACS Sustainable Chemistry and Engineering
https://doi.org/10.1021/acssuschemeng.3c05026
Ando H.; Komura N.
Recent progress in the synthesis of glycosphingolipids
Current Opinion in Chemical Biology
https://doi.org/10.1016/j.cbpa.2023.102423
Koike R.; Ota M.
Elastic network model reveals distinct flexibilities of capping proteins bound to CARMIL and twinfilin-tail
Proteins: Structure, Function and Bioinformatics
https://doi.org/10.1002/prot.26560
Sawamura T.; Yuki N.; Aoki K.; Horii K.; Horii Y.; Naitou K.; Tsukamoto S.; Shiina T.; Shimizu Y.
Alterations in descending brain-spinal pathways regulating colorectal motility in a rat model of Parkinson’s disease
American journal of physiology. Gastrointestinal and liver physiology
https://doi.org/10.1152/ajpgi.00181.2023
Yanaka S.; Watanabe H.; Yogo R.; Kongsema M.; Kondo S.; Yagi H.; Uchihashi T.; Kato K.
Quantitative Analysis of Therapeutic Antibody Interactions with Fcγ Receptors Using High-Speed Atomic Force Microscopy
Biological & pharmaceutical bulletin
https://doi.org/10.1248/bpb.b23-00751
Tsagakis I.; Yamanaka K.
An open chat with… Koji Yamanaka
FEBS Open Bio
https://doi.org/10.1002/2211-5463.13763
Pal R.; Yamazaki A.; Komura N.; Tanaka H.-N.; Imamura A.; Ishida H.; Ando H.
Convergent synthesis of functionalized derivatives of stage-specific embryonic antigens 3 & 4
Carbohydrate Research
https://doi.org/10.1016/j.carres.2023.108990
Komine O.; Ohnuma S.; Hinohara K.; Hara Y.; Shimada M.; Akashi T.; Watanabe S.; Sobue A.; Kawade N.; Ogi T.; Yamanaka K.
Genetic background variation impacts microglial heterogeneity and disease progression in amyotrophic lateral sclerosis model mice
iScience
https://doi.org/10.1016/j.isci.2024.108872
Iwamoto S.; Kobayashi T.; Hanamatsu H.; Yokota I.; Teranishi Y.; Iwamoto A.; Kitagawa M.; Ashida S.; Sakurai A.; Matsuo S.; Myokan Y.; Sugimoto A.; Ushioda R.; Nagata K.; Gotoh N.; Nakajima K.; Nishikaze T.; Furukawa J.-I.; Itano N.
Tolerable glycometabolic stress boosts cancer cell resilience through altered N-glycosylation and Notch signaling activation
Cell Death and Disease
Sakai A.; Shinkuma S.; Miura N.; Deguchi T.; Oginezawa M.; Nakajima M.; Katsumi T.; Hayashi R.; Abe R.
Possible relation of cathepsin C activity and seasonal fluctuation of skin lesions in Papillon Lefèvre syndrome
British Journal of Dermatology
2023年
Fujiwara T.K.; Takeuchi S.; Kalay Z.; Nagai Y.; Tsunoyama T.A.; Kalkbrenner T.; Iwasawa K.; Ritchie K.P.; Suzuki K.G.N.; Kusumi A.
Development of ultrafast camera-based single fluorescent-molecule imaging for cell biology
Journal of Cell Biology
Kobayashi J.; Wen R.; Nishikawa T.; Nunomura Y.; Suzuki T.; Sejima Y.; Gokan T.; Furukawa M.; Yokota T.; Osawa N.; Sato Y.; Nibu Y.; Mizutani T.; Oba M.
Natto extract inhibits infection caused by the Aujeszky’s disease virus in mice
Microbiology and Immunology
Ta H.P.; Clarisse C.; Maes E.; Yamakawa N.; Guérardel Y.; Krzewinski F.; Zarzycka W.; Touboul D.; Girardeau A.; Fonseca F.; Kermarrec A.; Viau M.; Riaublanc A.; Ropers M.H.
Membrane lipid composition of Carnobacterium maltaromaticum CNCM I-3298, a highly cryoresistant lactic bacterium
Chemistry and Physics of Lipids
https://doi.org/10.1016/j.chemphyslip.2023.105326
Lo T.; Kushima I.; Kimura H.; Aleksic B.; Okada T.; Kato H.; Inada T.; Nawa Y.; Torii Y.; Yamamoto M.; Kimura R.; Funabiki Y.; Kosaka H.; Numata S.; Kasai K.; Sasaki T.; Yokoyama S.; Munesue T.; Hashimoto R.; Yasuda Y.; Fujimoto M.; Usami M.; Itokawa M.; Arai M.; Ohi K.; Someya T.; Watanabe Y.; Egawa J.; Takahashi T.; Suzuki M.; Yamasue H.; Iwata N.; Ikeda M.; Ozaki N.
Association between copy number variations in parkin (PRKN) and schizophrenia and autism spectrum disorder: A case–control study
Neuropsychopharmacology Reports
Watanabe S.; Murata Y.; Oka Y.; Oiwa K.; Horiuchi M.; Iguchi Y.; Komine O.; Sobue A.; Katsuno M.; Ogi T.; Yamanaka K.
Mitochondria-associated membrane collapse impairs TBK1-mediated proteostatic stress response in ALS
Proceedings of the National Academy of Sciences of the United States of America
Senju C.; Nakazawa Y.; Oso T.; Shimada M.; Kato K.; Matsuse M.; Tsujimoto M.; Masaki T.; Miyazaki Y.; Fukushima S.; Tateishi S.; Utani A.; Murota H.; Tanaka K.; Mitsutake N.; Moriwaki S.; Nishigori C.; Ogi T.
Deep intronic founder mutations identified in the ERCC4/XPF gene are potential therapeutic targets for a high-frequency form of xeroderma pigmentosum
Proceedings of the National Academy of Sciences of the United States of America
Hayakawa K.; Hane M.; Hamagami H.; Imai M.; Tanaka H.; Kitajima K.; Sato C.
Interactions between polysialic acid and dopamine-lead compounds as revealed by biochemical and in silico docking simulation analyses
Glycoconjugate Journal
Hagino R.; Mozaki K.; Komura N.; Imamura A.; Ishida H.; Ando H.; Tanaka H.-N.
Synthetic Approaches to Ribosyl Adenosine 5′,5′′-Diphosphate Fragment of Poly(ADP-ribose)
European Journal of Organic Chemistry
Ohkawa Y.; Kanto N.; Nakano M.; Fujinawa R.; Kizuka Y.; Johnson E.L.; Harada Y.; Tamura J.-I.; Taniguchi N.
Involvement of langerin in the protective function of a keratan sulfate-based disaccharide in an emphysema mouse model
Journal of Biological Chemistry
Irie K.; Oda Y.; Sumikama T.; Oshima A.; Fujiyoshi Y.
The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel
Nature Communications
Arafuka S.; Fujishiro H.; Torii Y.; Sekiguchi H.; Habuchi C.; Miwa A.; Yoshida M.; Iritani S.; Iwasaki Y.; Ikeda M.; Ozaki N.
Neuropathological substrate of incident dementia in older patients with schizophrenia: A clinicopathological study
Psychiatry and Clinical Neurosciences
Kato D.; Aoyama Y.; Nishida K.; Takahashi Y.; Sakamoto T.; Takeda I.; Tatematsu T.; Go S.; Saito Y.; Kunishima S.; Cheng J.; Hou L.; Tachibana Y.; Sugio S.; Kondo R.; Eto F.; Sato S.; Moorhouse A.J.; Yao I.; Kadomatsu K.; Setou M.; Wake H.
Regulation of lipid synthesis in myelin modulates neural activity and is required for motor learning
GLIA
Murao M.; Kato R.; Kusano S.; Hisamatsu R.; Endo H.; Kawabata Y.; Kimura S.; Sato A.; Mori H.; Itami K.; Torii K.U.; Hagihara S.; Uchida N.
A Small Compound, HYGIC, Promotes Hypocotyl Growth Through Ectopic Ethylene Response
Plant and Cell Physiology
Carnielli C.M.; de Lima Morais T.M.; de Sá Patroni F.M.; Ribeiro A.C.P.; Brandão T.B.; Sobroza E.; Matos L.L.; Kowalski L.P.; Leme A.F.P.; Kawahara R.; Thaysen-Andersen M.
Comprehensive Glycoprofiling of Oral Tumors Associates N-Glycosylation With Lymph Node Metastasis and Patient Survival
Molecular and Cellular Proteomics
Furukawa S.; Kushima I.; Aleksic B.; Ozaki N.
Case reports of two siblings with autism spectrum disorder and 15q13.3 deletions
Neuropsychopharmacology Reports
Jilani N.A.K.; Oka N.; Ando K.; Hasbullah S.A.
Synthesis, Characterisation and Binding Evaluation of New 6-Amidinoindole Compound as the Potential Heme Binder; [Sintesis, Pencirian dan Penilaian Pengikatan Sebatian 6-Amidinoindol Baharu sebagai Pengikat Heme Berpotensi]
Sains Malaysiana
Ohkawa Y.; Kitano M.; Maeda K.; Nakano M.; Kanto N.; Kizuka Y.; Seike M.; Azuma A.; Yamaguchi Y.; Ookawara T.; Miyoshi E.; Taniguchi N.
Core Fucosylation Is Required for the Secretion of and the Enzymatic Activity of SOD3 in Nonsmall-Cell Lung Cancer Cells
Antioxidants and Redox Signaling
Farshadyeganeh P.; Nazim M.; Zhang R.; Ohkawara B.; Nakajima K.; Rahman M.A.; Nasrin F.; Ito M.; Takeda J.-I.; Ohe K.; Miyasaka Y.; Ohno T.; Masuda A.; Ohno K.
Splicing regulation of GFPT1 muscle-specific isoform and its roles in glucose metabolisms and neuromuscular junction
iScience
Inagaki M., Abe N., Li Z., Nakashima Y., Acharyya S., Ogawa K., Kawaguchi D., Hiraoka H., Banno A., Meng Z., Tada M., Ishida T., Lyu P., Kokubo K., Murase H., Hashiya F., Kimura Y., Uchida S., Abe H.
Cap analogs with a hydrophobic photocleavable tag enable facile purification of fully capped mRNA with various cap structures
Nature Communications
Sobue A., Komine O., Yamanaka K.
Neuroinflammation in Alzheimer’s disease: microglial signature and their relevance to disease
Inflammation and Regeneration
Kimura H., Kishi S., Narita H., Tanaka T., Okada T., Fujisawa D., Sugita N., Noma S., Matsumoto Y., Ohashi A., Mitsuyasu H., Yoshida K., Kawasaki H., Nishimura K., Ogura Y., Ozaki N.
Comorbid psychiatric disorders and long-term survival after liver transplantation in transplant facilities with a psychiatric consultation-liaison team: a multicenter retrospective study
BMC Gastroenterology
Yamauchi K., Soyano M., Kobayashi M., Kamatari Y.O., Mitsunaga T.
Protein aggregation model to explain the bioactivity of condensed tannins
Food Chemistry
Suzuki K., Nishio N., Kimura H., Tokura T., Kishi S., Ozaki N., Fujimoto Y., Sone M.
Comparison of quality of life and psychological distress in patients with tongue cancer undergoing a total/subtotal glossectomy or extended hemiglossectomy and free flap transfer: a prospective evaluation
International Journal of Oral and Maxillofacial Surgery
Ikazaki T., Ishikawa E., Tamashima H., Akiyama H., Kimuro Y., Yoritate M., Matoba H., Imamura A., Ishida H., Yamasaki S., Hirai G.
Ligand-Controlled Stereoselective Synthesis and Biological Activity of 2-Exomethylene Pseudo-glycoconjugates: Discovery of Mincle-Selective Ligands
Angewandte Chemie – International Edition
Kozai D., Numoto N., Nishikawa K., Kamegawa A., Kawasaki S., Hiroaki Y., Irie K., Oshima A., Hanzawa H., Shimada K., Kitano Y., Fujiyoshi Y.
Recognition Mechanism of a Novel Gabapentinoid Drug, Mirogabalin, for Recombinant Human α2δ1, a Voltage-Gated Calcium Channel Subunit: Recognition mechanism of mirogabalin for α2δ1
Journal of Molecular Biology
Nishiguchi S., Kasai R.S., Uchihashi T.
Antiparallel dimer structure of CELSR cadherin in solution revealed by high-speed-atomic force microscopy
Proceedings of the National Academy of Sciences of the United States of America
Asano T., Udagawa T., Komura N., Imamura A., Ishida H., Ando H., Tanaka H.-N.
Unprecedented neighboring group participation of C2 N-imidoxy functionalities for 1,2-trans-selective glycosylation
Carbohydrate Research
Kusumi A., Tsunoyama T.A., Tang B., Hirosawa K.M., Morone N., Fujiwara T.K., Suzuki K.G.N.
Cholesterol- and actin-centered view of the plasma membrane: updating the Singer-Nicolson fluid mosaic model to commemorate its 50th anniversary
Molecular biology of the cell
Sugiura K., Kawai Y., Yamamoto A., Yoshioka H., Kiyohara Y., Iida A., Ozawa Y., Nishikawa M., Miura N., Hanamatsu H., Furukawa J.-I., Shinohara Y.
Exposure to brefeldin A induces unusual expression of hybrid- and complex-type free N-glycans in HepG2 cells
Biochimica et Biophysica Acta – General Subjects
Liu Y.-S., Wang Y., Zhou X., Zhang L., Yang G., Gao X.-D., Murakami Y., Fujita M., Kinoshita T.
Accumulated precursors of specific GPI-anchored proteins upregulate GPI biosynthesis with ARV1
The Journal of cell biology
Kondo Y., Okajima T.
Inhibitory machinery for the functional dystroglycan glycosylation
Journal of biochemistry
Minami S., Niwa T., Uemura E., Koike R., Taguchi H., Ota M.
Prediction of chaperonin GroE substrates using small structural patterns of proteins
FEBS Open Bio
Hanamatsu H., Miura Y., Nishikaze T., Yokota I., Homan K., Onodera T., Hayakawa Y., Iwasaki N., Furukawa J.-I.
Simultaneous and sialic acid linkage-specific N- and O-linked glycan analysis by ester-to-amide derivatization
Glycoconjugate Journal
Chau T.H., Chernykh A., Kawahara R., Thaysen-Andersen M.
Critical considerations in N-glycoproteomics
Current Opinion in Chemical Biology
Watanabe S., Horiuchi M., Murata Y., Komine O., Kawade N., Sobue A., Yamanaka K.
Sigma-1 receptor maintains ATAD3A as a monomer to inhibit mitochondrial fragmentation at the mitochondria-associated membrane in amyotrophic lateral sclerosis
Neurobiology of Disease
Nakajo T., Kusaka S., Hiraoka H., Nomura K., Matsubara N., Baba R., Yoshida Y., Nakamoto K., Honma M., Iguchi H., Uchihashi T., Abe H., Matsuda R.
Creation of single molecular conjugates of metal-organic cages and DNA
Chemical Communications
Kato H., Kimura H., Kushima I., Takahashi N., Aleksic B., Ozaki N.
The genetic architecture of schizophrenia: review of large-scale genetic studies
Journal of Human Genetics
Sorin M.N., Di Maio A., Silva L.M., Ebert D., Delannoy C.P., Nguyen N.-K., Guerardel Y., Chai W., Halary F., Renaudin-Autain K., Liu Y., Bressollette-Bodin C., Stehle T., McIlroy D.
Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus
Cell Reports
Soon J.W., Oohora K., Uchihashi T., Hayashi T.
Disulfide Bond-mediated Oligomerization of a Green Fluorescent Protein in Solution
Chemistry Letters
Rahman M.M., Nakanishi R., Tsukada F., Takashima S., Wakihara Y., Kamatari Y.O., Shimizu K., Okada A., Inoshima Y.
Identification of Suitable Internal Control miRNAs in Bovine Milk Small Extracellular Vesicles for Normalization in Quantitative Real-Time Polymerase Chain Reaction
Membranes
Anbo H., Sakuma K., Fukuchi S., Ota M.
How AlphaFold2 Predicts Conditionally Folding Regions Annotated in an Intrinsically Disordered Protein Database, IDEAL
Biology
Saitoh S., Takaki T., Nakajima K., Wo B., Terashima H., Shimo S., Nguyen H.B., Thai T.Q., Kumamoto K., Kunisawa K., Nagao S., Tojo A., Ohno N., Takahashi K.
Treatment of tubular damage in high-fat-diet-fed obese mice using sodium-glucose cotransporter inhibitors
PLoS ONE
Suzuki K.G.N., Kusumi A.
Refinement of Singer-Nicolson fluid-mosaic model by microscopy imaging: Lipid rafts and actin-induced membrane compartmentalization
Biochimica et Biophysica Acta – Biomembranes
Abe J., Takeda Y., Kikuma T., Kizuka Y., Kajiura H., Kajihara Y., Ito Y.
Squaryl group-modified UDP analogs as inhibitors of the endoplasmic reticulum-resident folding sensor enzyme UGGT
Chemical Communications
Nakagawa T., Iwaki Y., Wu D., Hane M., Sato C., Kitajima K.
Identification and characterization of a deaminoneuraminic acid (Kdn)-specific aldolase from Sphingobacterium species
Glycobiology
Yamashita H., Komine O., Fujimori-Tonou N., Yamanaka K.
Comprehensive expression analysis with cell-type-specific transcriptome in ALS-linked mutant SOD1 mice: Revisiting the active role of glial cells in disease
Frontiers in Cellular Neuroscience
Hasegawa S., Inagaki M., Kato S., Li Z., Kimura Y., Abe H.
Synthesis of nucleoside oligophosphates by electrophilic activation of phosphorothioate
Organic and Biomolecular Chemistry
Suzuki K.G.N., Komura N., Ando H.
Recently developed glycosphingolipid probes and their dynamic behavior in cell plasma membranes as revealed by single-molecule imaging
Glycoconjugate Journal
Kimura H., Kushima I., Banno M., Inada T., Yoshimi A., Aleksic B., Ozaki N.
Clinical characterization of patients with schizophrenia and 16p13.11 duplication: A case series
Neuropsychopharmacology Reports
Kawamata M., Suzuki H.I., Kimura R., Suzuki A.
Optimization of Cas9 activity through the addition of cytosine extensions to single-guide RNAs
Nature Biomedical Engineering
Arioka Y., Okumura H., Sakaguchi H., Ozaki N.
Shedding light on latent pathogenesis and pathophysiology of mental disorders: the potential of iPS cell technology
Psychiatry and Clinical Neurosciences
Miyake N., Tsurusaki Y., Fukai R., Kushima I., Okamoto N., Ohashi K., Nakamura K., Hashimoto R., Hiraki Y., Son S., Kato M., Sakai Y., Osaka H., Deguchi K., Matsuishi T., Takeshita S., Fattal-Valevski A., Ekhilevitch N., Tohyama J., Yap P., Keng W.T., Kobayashi H., Takubo K., Okada T., Saitoh S., Yasuda Y., Murai T., Nakamura K., Ohga S., Matsumoto A., Inoue K., Saikusa T., Hershkovitz T., Kobayashi Y., Morikawa M., Ito A., Hara T., Uno Y., Seiwa C., Ishizuka K., Shirahata E., Fujita A., Koshimizu E., Miyatake S., Takata A., Mizuguchi T., Ozaki N., Matsumoto N.
Molecular diagnosis of 405 individuals with autism spectrum disorder
European Journal of Human Genetics
Yamanaka K.
Neuroinflammation in neurodegenerative disease
Nagoya Journal of Medical Science
Maekawa K., Yamanaka K.
Role of sex hormones in neuroinflammation in Alzheimer’s disease
Clinical and Experimental Neuroimmunology
Chau T.H., Chernykh A., Ugonotti J., Parker B.L., Kawahara R., Thaysen-Andersen M.
Glycomics-Assisted Glycoproteomics Enables Deep and Unbiased N-Glycoproteome Profiling of Complex Biological Specimens
Methods in molecular biology (Clifton, N.J.)
Uegaki R., Uchino H., Wasada H., Suga H.
Fumonisin reduction using fungicides in forage corn cultivation
Grassland Science
Wakayama K., Kimura S., Kobatake Y., Kamishina H., Nishii N., Takashima S., Honda R., Kamatari Y.O.
Molecular Mechanisms of Aggregation of Canine SOD1 E40K Amyloidogenic Mutant Protein
Molecules
Hamajima S., Komura N., Tanaka H.-N., Imamura A., Ishida H., Ichiyanagi T., Ando H.
Investigation of the Protection of the C4 Hydroxyl Group in Macrobicyclic Kdo Donors
Molecules
Lo T., Kushima I., Aleksic B., Yoshimi A., Someya T., Watanabe Y., Ozaki N.
Clinical manifestations of schizophrenia in four patients with variants in voltage-gated calcium channel-encoding genes: a case series
Psychiatry and Clinical Neurosciences
Matsuo Y., Uchihashi T., Inada T.
Decoding of the ubiquitin code for clearance of colliding ribosomes by the RQT complex
Nature Communications
Omoto T., Wu D., Maruyama E., Tajima K., Hane M., Sato C., Kitajima K.
Forced expression of α2,3-sialyltransferase IV rescues impaired heart development in α2,6-sialyltransferase I-deficient medaka
Biochemical and Biophysical Research Communications
Yokoyama S., Hayashi M., Goto T., Muto Y., Tanaka K.
Identification of cfxA gene variants and susceptibility patterns in β-lactamase-producing Prevotella strains
Anaerobe
Okawa R., Hayashi Y., Yamashita Y., Matsubayashi Y., Ogawa-Ohnishi M.
Arabinogalactan protein polysaccharide chains are required for normal biogenesis of plasmodesmata
Plant Journal
Hayasaka R., Tabata S., Hasebe M., Ikeda S., Hikita T., Oneyama C., Yoshitake J., Onoshima D., Takahashi K., Shibata T., Uchida K., Baba Y., Soga T., Tomita M., Hirayama A.
Metabolomics of small extracellular vesicles derived from isocitrate dehydrogenase 1-mutant HCT116 cells collected by semi-automated size exclusion chromatography
Frontiers in Molecular Biosciences
Yamashita H., Komine O., Fujimori-Tonou N., Yamanaka K.
Comprehensive expression analysis with cell-type-specific transcriptome in ALS-linked mutant SOD1 mice: Revisiting the active role of glial cells in disease
Frontiers in Cellular Neuroscience
https://doi.org/10.3389/fncel.2022.1045647
Nakagawa Y.
Recent Progress in the Development and Application of Lectin Mimics
Trends in Glycoscience and Glycotechnology
Hane M.
Sialoglycomic Analysis Using Sialic Acid Recognition Molecules as Probes
Trends in Glycoscience and Glycotechnology
Sugiyama Y., Uno K., Matsui Y.
Types of anomalies in two-dimensional videobased gait analysis in uncontrolled environments
PLoS Computational Biology
Suganuma Y., Imamura A., Ando H., Kiso M., Takematsu H., Tsubata T., Ishida H.
Improved synthesis of CD22-binding sialosides and its application for further development of potent CD22 inhibitors
Glycoconjugate Journal
Yamaguchi E., Komura N., Tanaka H.-N., Imamura A., Ishida H., Groux-Degroote S., Mühlenhoff M., Suzuki K.G.N., Ando H.
Fluorescent GD2 analog for single-molecule imaging
Glycoconjugate Journal
Fu B., Wu D., Yasumasu S., Hane M., Sato C., Kitajima K.
Critical Role of the Cortical Alveolus Protease Alveolin in Chorion Hardening In Vivo at Medaka Fertilization
Biomolecules
Komatsu S., Kitai H., Suzuki H.I.
Network Regulation of microRNA Biogenesis and Target Interaction
Cells
Imamura A., Ando H., Ishida H.
Chemical Synthesis of Gangliosides
Methods in Molecular Biology
Hanamatsu H., Nishikaze T., Furukawa J.-I.
Comprehensive Glycan Analysis of Sphingolipids in Human Serum/Plasma
Methods in Molecular Biology
Suzuki K.G.N.
Single-Molecule Imaging of Ganglioside Probes in Living Cell Plasma Membranes
Methods in Molecular Biology
Hanamatsu H., Makino S., Ohara M., Suda G., Yokota I., Nishihara S., Sakamoto N., Furukawa J.-I.
Simultaneous determination of heparan sulfate, chondroitin/dermatan sulfates, and hyaluronan glycosaminoglycan disaccharides by high-performance liquid chromatography using a reverse-phase column with adamantyl groups
Journal of Chromatography A
Hirata T., Harada Y., Hirosawa K.M., Tokoro Y., Suzuki K.G.N., Kizuka Y.
N-acetylglucosaminyltransferase-V (GnT-V)-enriched small extracellular vesicles mediate N-glycan remodeling in recipient cells
iScience
Suzuki K.G.N., Kusumi A.
Refinement of Singer-Nicolson fluid-mosaic model by microscopy imaging: Lipid rafts and actin-induced membrane compartmentalization
Biochimica et Biophysica Acta – Biomembranes
Ren W.-W., Fujita M.
Simple N-Glycan Profile Analysis Using Lectin Staining, Mass Spectrometry, and GlycoMaple
Methods in Molecular Biology
Li F., Ebihara A., Sakahara Y., Matsumoto S., Ueno R., Bao W., Kimura M., Fuji S.-I., Shimizu M., Kageyama K., Suga H.
Synergistic effect of amino acid substitutions in CYP51B for prochloraz resistance in Fusarium fujikuroi
Pesticide Biochemistry and Physiology
Inokuchi J.-I., Go S., Hirabayashi Y.
Synthesis of O-Linked Glycoconjugates in the Nervous System
Advances in Neurobiology
2022年
Yasuda T., Watanabe H., Hirosawa K.M., Suzuki K.G.N., Suga K., Hanashima S.
Fluorescence Spectroscopic Analysis of Lateral and Transbilayer Fluidity of Exosome Membranes
Langmuir
https://doi.org/10.1021/acs.langmuir.2c02258
Hamajima S., Komura N., Tanaka H.-N., Imamura A., Ishida H., Noguchi H., Ichiyanagi T., Ando H.
Full Stereocontrol in α-Glycosidation of 3-Deoxy- d – Manno-2-octulosonic Acid (Kdo) Using Macrobicyclic Glycosyl Donors
Organic Letters
Tomida S., Nagae M., Kizuka Y.
The stem region of α1,6-fucosyltransferase FUT8 is required for multimer formation but not catalytic activity
Journal of Biological Chemistry
Kitai H., Kato N., Ogami K., Komatsu S., Watanabe Y., Yoshino S., Koshi E., Tsubota S., Funahashi Y., Maeda T., Furuhashi K., Ishimoto T., Kosugi T., Maruyama S., Kadomatsu K., Suzuki H.I.
Systematic characterization of seed overlap microRNA cotargeting associated with lupus pathogenesis
BMC Biology
Suzuki K., Tange M., Yamagishi R., Hanada H., Mukai S., Sato T., Tanaka T., Akashi T., Kadomatsu K., Maeda T., Miida T., Takeuchi I., Murakami H., Sekido Y., Murakami-Tonami Y.
SMG6 regulates DNA damage and cell survival in Hippo pathway kinase LATS2-inactivated malignant mesothelioma
Cell Death Discovery
Mizobuchi K., Kushima I., Kato H., Miyajima M., Kimura H., Ozaki N.
Turner syndrome presenting with idiopathic regression: A case report
Psychiatry and Clinical Neurosciences
Chantarasrivong C., Okada R., Yamane Y., Yang X., Higuchi Y., Konishi M., Komura N., Ando H., Yokokawa R., Yamashita F.
Disposition of E-selectin-targeting liposomes in tumor spheroids with a perfusable vascular network
Drug Metabolism and Pharmacokinetics
Kushima I., Aleksic B., Kimura H., Nakatochi M., Lo T., Ikeda M., Arai M., Hashimoto R., Numata S., Okamura Y., Obara T., Inada T., Ozaki N.
X chromosome aneuploidies and schizophrenia: association analysis and phenotypic characterization
Psychiatry and Clinical Neurosciences
Kawashima N., Naito S., Hanamatsu H., Nagane M., Takeuchi Y., Furukawa J.-I., Iwasaki N., Yamashita T., Nakayama K.-I.
Glycosphingolipid GM3 prevents albuminuria and podocytopathy induced by anti-nephrin antibody
Scientific Reports
Young V.C., Nakanishi H., Meyer D.J., Nishizawa T., Oshima A., Artigas P., Abe K.
Structure and function of H+/K+ pump mutants reveal Na+/K+ pump mechanisms
Nature Communications
Kizuka Y.
Metabolic utilization and remodeling of glycan biosynthesis using fucose analogs
Biochimica et Biophysica Acta – General Subjects
Yang Y., Liu G., Li F., Carey L.B., Sun C., Ling K., Tachikawa H., Fujita M., Gao X.-D., Nakanishi H.
Receptor for advanced glycation end-products (RAGE) mediates phagocytosis in nonprofessional phagocytes
Communications Biology
Shimamura Y., Furuhashi K., Tanaka A., Karasawa M., Nozaki T., Komatsu S., Watanabe K., Shimizu A., Minatoguchi S., Matsuyama M., Sawa Y., Tsuboi N., Ishimoto T., Suzuki H.I., Maruyama S.
Mesenchymal stem cells exert renoprotection via extracellular vesicle-mediated modulation of M2 macrophages and spleen-kidney network
Communications Biology
Ertunc N., Phitak T., Wu D., Fujita H., Hane M., Sato C., Kitajima K.
Sulfation of sialic acid is ubiquitous and essential for vertebrate development
Scientific Reports
Nagae M., Hirata T., Tateno H., Mishra S.K., Manabe N., Osada N., Tokoro Y., Yamaguchi Y., Doerksen R.J., Shimizu T., Kizuka Y.
Discovery of a lectin domain that regulates enzyme activity in mouse N-acetylglucosaminyltransferase-IVa (MGAT4A)
Communications Biology
Suzuki S., Iida M., Hiroaki Y., Tanaka K., Kawamoto A., Kato T., Oshima A.
Structural insight into the activation mechanism of MrgD with heterotrimeric Gi-protein revealed by cryo-EM
Communications Biology
Kimura H., Nakatochi M., Aleksic B., Guevara J., Toyama M., Hayashi Y., Kato H., Kushima I., Morikawa M., Ishizuka K., Okada T., Tsurusaki Y., Fujita A., Miyake N., Ogi T., Takata A., Matsumoto N., Buxbaum J., Ozaki N., Sebat J.
Exome sequencing analysis of Japanese autism spectrum disorder case-control sample supports an increased burden of synaptic function-related genes
Translational Psychiatry
Imai Y., Iida M., Kanie K., Katsuno M., Kato R.
Label-free morphological sub-population cytometry for sensitive phenotypic screening of heterogenous neural disease model cells
Scientific Reports
Huang S., Haga Y., Li J., Zhang J., Kweon H.K., Seino J., Hirayama H., Fujita M., Moremen K.W., Andrews P., Suzuki T., Wang Y.
Mitotic phosphorylation inhibits the Golgi mannosidase MAN1A1
Cell Reports
Ohyama Y., Yamaguchi H., Ogata S., Chiurlia S., Cox S.N., Kouri N.-M., Stangou M.J., Nakajima K., Hayashi H., Inaguma D., Hasegawa M., Yuzawa Y., Tsuboi N., Renfrow M.B., Novak J., Papagianni A.A., Schena F.P., Takahashi K.
Racial heterogeneity of IgA1 hinge-region O-glycoforms in patients with IgA nephropathy
iScience
Kondoh K., Akahori H., Muto Y., Terada T.
Identification of Key Genes and Pathways Associated with Preeclampsia by a WGCNA and an Evolutionary Approach
Genes
Nagao H., Ninomiya M., Sugiyama H., Itabashi A., Uno K., Tanaka K., Koketsu M.
Comparative analysis of p-terphenylquinone and seriniquinone derivatives as reactive oxygen species-modulating agents
Bioorganic and Medicinal Chemistry Letters
Tsutsumi N., Ito A., Niko Y., Bando Y., Takahashi K., Ikeda M., Yoneyama K., Nakamura T., Izumi M., Ochi R.
Glycolipid-Type Amphiphiles with a Small Anilinochloromaleimide-Based Luminogen Exhibiting Aggregation-Induced Emission
ChemistrySelect
Chan F.-Y., Kurosaki R., Ganser C., Takeda T., Uchihashi T.
Tip-scan high-speed atomic force microscopy with a uniaxial substrate stretching device for studying dynamics of biomolecules under mechanical stress
Review of Scientific Instruments
Miura N., Hanamatsu H., Yokota I., Akasaka-Manya K., Manya H., Endo T., Shinohara Y., Furukawa J.-I.
Toolbox Accelerating Glycomics (TAG): Improving Large-Scale Serum Glycomics and Refinement to Identify SALSA-Modified and Rare Glycans
International Journal of Molecular Sciences
Zhang A., Tsukamoto Y., Takeuchi H., Nishiwaki K., Tashima Y., Okajima T.
Secretory expression of mammalian NOTCH tandem epidermal growth factor-like repeats based on increased O-glycosylation
Analytical Biochemistry
Miyakawa K., Miyashita N., Horie M., Terasaki Y., Tanaka H., Urushiyama H., Fukuda K., Okabe Y., Ishii T., Kuwahara N., Suzuki H.I., Nagase T., Saito A.
ASCL1 regulates super-enhancer-associated miRNAs to define molecular subtypes of small cell lung cancer
Cancer Science
Lyu F., An S., Kobayashi Y., Nomura K., Baba R., Abe N., Hiraoka H., Hashiya F., Shu Z., Ui-Tei K., Kimura Y., Abe H.
A 2′-modified uridine analog, 2′-O-(methylthiomethoxy)methyl uridine, for siRNA applications
Bioorganic and Medicinal Chemistry Letters
Yoshitake J., Azami M., Sei H., Onoshima D., Takahashi K., Hirayama A., Uchida K., Baba Y., Shibata T.
Rapid Isolation of Extracellular Vesicles Using a Hydrophilic Porous Silica Gel-Based Size-Exclusion Chromatography Column
Analytical Chemistry
Suga H., Hayashi M., Kushiro M., Miyano N., Inoue H., Nakajima K., Kawakami T., Tonooka T., Nakajima T., Shimizu M., Kageyama K.
A Novel Medium for Isolating Two Japanese Species in the Fusarium graminearum Species Complex and a Dipstick DNA Chromatography Assay for Species Identification and Trichothecene Typing
Journal of Fungi
Hirata T., Yang J., Tomida S., Tokoro Y., Kinoshita T., Fujita M., Kizuka Y.
ER entry pathway and glycosylation of GPI-anchored proteins are determined by N-terminal signal sequence and C-terminal GPI-attachment sequence
Journal of Biological Chemistry
Yamamoto T., Yasuda S., Kasai R.S., Nakano R., Hikiri S., Sugaya K., Hayashi T., Ogasawara S., Shiroishi M., Fujiwara T.K., Kinoshita M., Murata T.
A methodology for creating mutants of G-protein coupled receptors stabilized in active state by combining statistical thermodynamics and evolutionary molecular engineering
Protein Science
Murakami A., Noda S., Kazuta T., Hirano S., Kimura S., Nakanishi H., Matsuo K., Tsujikawa K., Iida M., Koike H., Sakamoto K., Hara Y., Kuru S., Kadomatsu K., Shimamura T., Ogi T., Katsuno M.
Metabolome and transcriptome analysis on muscle of sporadic inclusion body myositis
Annals of Clinical and Translational Neurology
Annals of Clinical and Translational Neurology
Establishment of induced pluripotent stem cells from a patient with 16p13.11 duplication and VPS13B deletion
Stem Cell Research
Go S., Sato C., Hane M., Go S., Kitajima K.
Implication of N-glycolylneuraminic acid in regulation of cell adhesiveness of C2C12 myoblast cells during differentiation into myotube cells
Glycoconjugate Journal
Hagino R., Mozaki K., Komura N., Imamura A., Ishida H., Ando H., Tanaka H.-N.
Straightforward Synthesis of the Poly(ADP-ribose) Branched Core Structure
ACS Omega
Yoshida Y., Zheng T., Tanabe W., Tomoike F., Hashiya F., Suzuki T., Hirota S., Saiki Y., Horii A., Hirayama A., Soga T., Kimura Y., Abe H.
Development of Fluorophosphoramidate as a Biocompatibly Transformable Functional Group and its Application as a Phosphate Prodrug for Nucleoside Analogs
ChemMedChem
Tsukada F., Takashima S., Wakihara Y., Kamatari Y.O., Shimizu K., Okada A., Inoshima Y.
Characterization of miRNAs in Milk Small Extracellular Vesicles from Enzootic Bovine Leukosis Cattle
International Journal of Molecular Sciences
Wen P., Chen J., Zuo C., Gao X., Fujita M., Yang G.
Proteome and Glycoproteome Analyses Reveal the Protein N-Linked Glycosylation Specificity of STT3A and STT3B
Cells
Osada N., Nagae M., Nakano M., Hirata T., Kizuka Y.
Examination of differential glycoprotein preferences of N-acetylglucosaminyltransferase-IV isozymes a and b
Journal of Biological Chemistry
Yan M., Komatsu N., Muro R., Huynh N.C.-N., Tomofuji Y., Okada Y., Suzuki H.I., Takaba H., Kitazawa R., Kitazawa S., Pluemsakunthai W., Mitsui Y., Satoh T., Okamura T., Nitta T., Im S.-H., Kim C.J., Kollias G., Tanaka S., Okamoto K., Tsukasaki M., Takayanagi H.
ETS1 governs pathological tissue-remodeling programs in disease-associated fibroblasts
Nature Immunology
Takashima S., Fujita H., Toyoshi K., Ohba A., Hirata Y., Shimozawa N., Oh-hashi K.
Hypomorphic mutation of PEX3 with peroxisomal mosaicism reveals the oscillating nature of peroxisome biogenesis coupled with differential metabolic activities
Molecular Genetics and Metabolism
Kushima I., Nakatochi M., Aleksic B., Okada T., Kimura H., Kato H., Morikawa M., Inada T., Ishizuka K., Torii Y., Nakamura Y., Tanaka S., Imaeda M., Takahashi N., Yamamoto M., Iwamoto K., Nawa Y., Ogawa N., Iritani S., Hayashi Y., Lo T., Otgonbayar G., Furuta S., Iwata N., Ikeda M., Saito T., Ninomiya K., Okochi T., Hashimoto R., Yamamori H., Yasuda Y., Fujimoto M., Miura K., Itokawa M., Arai M., Miyashita M., Toriumi K., Ohi K., Shioiri T., Kitaichi K., Someya T., Watanabe Y., Egawa J., Takahashi T., Suzuki M., Sasaki T., Tochigi M., Nishimura F., Yamasue H., Kuwabara H., Wakuda T., Kato T.A., Kanba S., Horikawa H., Usami M., Kodaira M., Watanabe K., Yoshikawa T., Toyota T., Yokoyama S., Munesue T., Kimura R., Funabiki Y., Kosaka H., Jung M., Kasai K., Ikegame T., Jinde S., Numata S., Kinoshita M., Kato T., Kakiuchi C., Yamakawa K., Suzuki T., Hashimoto N., Ishikawa S., Yamagata B., Nio S., Murai T., Son S., Kunii Y., Yabe H., Inagaki M., Goto Y.-I., Okumura Y., Ito T., Arioka Y., Mori D., Ozaki N.
Cross-Disorder Analysis of Genic and Regulatory Copy Number Variations in Bipolar Disorder, Schizophrenia, and Autism Spectrum Disorder
Biological Psychiatry
Kushima I., Imaeda M., Tanaka S., Kato H., Oya-Ito T., Nakatochi M., Aleksic B., Ozaki N.
Contribution of copy number variations to the risk of severe eating disorders
Psychiatry and Clinical Neurosciences
Morikawa C., Sugiura K., Kondo K., Yamamoto Y., Kojima Y., Ozawa Y., Yoshioka H., Miura N., Piao J., Okada K., Hanamatsu H., Tsuda M., Tanaka S., Furukawa J.-I., Shinohara Y.
Evaluation of the context of downstream N- and free N-glycomic alterations induced by swainsonine in HepG2 cells
Biochimica et Biophysica Acta – General Subjects
Nakagawa Y., Oya Y., Ojika M., Igarashi Y., Ito Y.
Chemical modification of pradimicin A to suppress aggregation without impairing D-mannose-binding and antifungal activities
Tetrahedron
Higashi S.L., Shintani Y., Ikeda M.
Installing Reduction Responsiveness into Biomolecules by Introducing Nitroaryl Groups
Chemistry – A European Journal
Wu D., Gilormini P.-A., Toda S., Biot C., Lion C., Guérardel Y., Sato C., Kitajima K.
A novel C-domain-dependent inhibition of the rainbow trout CMP-sialic acid synthetase activity by CMP-deaminoneuraminic acid
Biochemical and Biophysical Research Communications
https://doi.org/10.1016/j.bbrc.2022.05.031
Tsuchiya A., Kobayashi M., Kamatari Y.O., Mitsunaga T., Yamauchi K.
Development of flavonoid probes and the binding mode of the target protein and quercetin derivatives
Bioorganic and Medicinal Chemistry
Hirata T., Takata M., Tokoro Y., Nakano M., Kizuka Y.
Shedding of N-acetylglucosaminyltransferase-V is regulated by maturity of cellular N-glycan
Communications biology
Hamaya Y., Komura N., Imamura A., Ishida H., Ando H., Tanaka H.-N.
Protecting-group- and microwave-free synthesis of β-glycosyl esters and aryl β-glycosides of N-acetyl-D-glucosamine
Bioorganic and Medicinal Chemistry
Segi N., Ozaki T., Suzuki Y., Ouchida J., Imagama S., Kadomatsu K., Sakamoto K.
Close association of polarization and LC3, a marker of autophagy, in axon determination in mouse hippocampal neurons
Experimental Neurology
Nishiguchi S., Furuta T., Uchihashi T.
Multiple dimeric structures and strand-swap dimerization of E-cadherin in solution visualized by high-speed atomic force microscopy
Proceedings of the National Academy of Sciences of the United States of America
Tsukamoto Y., Ogawa M., Yogi K., Tashima Y., Takeuchi H., Okajima T.
Glycoproteomics of NOTCH1 EGF repeat fragments overexpressed with different glycosyltransferases in HEK293T cells reveals insights into O-GlcNAcylation of NOTCH1
Glycobiology
Kushima I., Uematsu M., Ishizuka K., Aleksic B., Ozaki N.
Psychiatric patients with a de novo 17q12 deletion: Two case reports
Psychiatry and Clinical Neurosciences
Abe N., Imaeda A., Inagaki M., Li Z., Kawaguchi D., Onda K., Nakashima Y., Uchida S., Hashiya F., Kimura Y., Abe H.
Complete Chemical Synthesis of Minimal Messenger RNA by Efficient Chemical Capping Reaction
ACS Chemical Biology
Hatanaka R., Araki E., Hane M., Go S., Wu D., Kitajima K., Sato C.
The α2,8-sialyltransferase 6 (St8sia6) localizes in the ER and enhances the anchorage-independent cell growth in cancer
Biochemical and Biophysical Research Communications
Tanaka S., Morita M., Yamagishi T., Madapally H.V., Hayashida K., Khandelia H., Gerle C., Shigematsu H., Oshima A., Abe K.
Structural Basis for Binding of Potassium-Competitive Acid Blockers to the Gastric Proton Pump
Journal of medicinal chemistry
https://doi.org/10.1021/acs.jmedchem.2c00338
Umezawa F., Natsume M., Fukusada S., Nakajima K., Yamasaki F., Kawashima H., Kuo C.-W., Khoo K.-H., Shimura T., Yagi H., Kato K.
Cancer Malignancy Is Correlated with Upregulation of PCYT2-Mediated Glycerol Phosphate Modification of α-Dystroglycan
International Journal of Molecular Sciences
Ito K.N., Isobe K., Osakada F.
Fast z-focus controlling and multiplexing strategies for multiplane two-photon imaging of neural dynamics
Neuroscience Research
Vibhute A.M., Tanaka H.-N., Mishra S.K., Osuka R.F., Nagae M., Yonekawa C., Korekane H., Doerksen R.J., Ando H., Kizuka Y.
Structure-based design of UDP-GlcNAc analogs as candidate GnT-V inhibitors
Biochimica et Biophysica Acta – General Subjects
Shibata A., Higashi S.L., Ikeda M.
Nucleic acid-based fluorescent sensor systems: a review
Polymer Journal
Wang Y., Kanie K., Takezawa T., Horikawa M., Kaneko K., Sugimoto A., Yamawaki-Ogata A., Narita Y., Kato R.
Bi-layered carboxymethyl cellulose-collagen vitrigel dual-surface adhesion-prevention membrane
Carbohydrate Polymers
Takahashi M., Komura N., Yoshida Y., Yamaguchi E., Hasegawa A., Tanaka H.-N., Imamura A., Ishida H., Suzuki K.G.N., Ando H.
Development of lacto-series ganglioside fluorescent probe using late-stage sialylation and behavior analysis with single-molecule imaging
RSC Chemical Biology
Daher W., Leclercq L.-D., Johansen M.D., Hamela C., Karam J., Trivelli X., Nigou J., Guérardel Y., Kremer L.
Glycopeptidolipid glycosylation controls surface properties and pathogenicity in Mycobacterium abscessus
Cell Chemical Biology
Higashi S.L., Isogami A., Takahashi J., Shibata A., Hirosawa K.M., Suzuki K.G.N., Sawada S., Tsukiji S., Matsuura K., Ikeda M.
Construction of a Reduction-responsive DNA Microsphere using a Reduction-cleavable Spacer based on a Nitrobenzene Scaffold
Chemistry – An Asian Journal
Hane M., Kitajima K., Sato C.
Comprehensive Analysis of Oligo/Polysialylglycoconjugates in Cancer Cell Lines
International Journal of Molecular Sciences
Toyama M., Takasaki Y., Branko A., Kimura H., Kato H., Nawa Y., Kushima I., Ishizuka K., Shimamura T., Ogi T., Ozaki N.
Exome sequencing of Japanese schizophrenia multiplex families supports the involvement of calcium ion channels
PLoS ONE
Takahashi Y., Abe C., Hane M., Wu D., Kitajima K., Sato C.
Polysialylation in a DISC1 Mutant Mouse
International Journal of Molecular Sciences
Kimura S., Kamishina H., Hirata Y., Furuta K., Furukawa Y., Yamato O., Maeda S., Kamatari Y.O.
Novel oxindole compounds inhibit the aggregation of amyloidogenic proteins associated with neurodegenerative diseases
Biochimica et Biophysica Acta – General Subjects
Masaki Y., Yamaguchi M., Takeuchi R.F., Osakada F.
Monosynaptic rabies virus tracing from projection-targeted single neurons
Neuroscience Research
Hirata T., Takekiyo T., Yoshimura Y., Tokoro Y., Ishizaki T., Kizuka Y., Kuroda K.
Cryostorage of unstable N-acetylglucosaminyltransferase-V by synthetic zwitterions
RSC Advances
Hasegawa Y., Motoyama M., Hamamoto A., Kimura S., Kamatari Y.O., Kamishina H., Oh-Hashi K., Furuta K., Hirata Y.
Identification of Novel Oxindole Compounds That Suppress ER Stress-Induced Cell Death as Chemical Chaperones
ACS Chemical Neuroscience
Mery A., Jawhara S., François N., Cornu M., Poissy J., Martinez-Esparza M., Poulain D., Sendid B., Guerardel Y.
Identification of fungal trehalose for the diagnosis of invasive candidiasis by mass spectrometry
Biochimica et Biophysica Acta – General Subjects
Araki E., Hane M., Hatanaka R., Kimura R., Tsuda K., Konishi M., Komura N., Ando H., Kitajima K., Sato C.
Analysis of biochemical features of ST8 α-N-acetyl-neuraminide α2,8-sialyltransferase (St8sia) 5 isoforms
Glycoconjugate Journal
Suga H., Okumura R., Ikawa M., Shimizu M., Kageyama K.
A natural two-nucleotide deletion affirms role for NADPH oxidase in pathogenicity and perithecium formation in Fusarium graminearum species complex
Plant Pathology
Kudo Y., Endo S., Fujita M., Ota A., Kamatari Y.O., Tanaka Y., Ishikawa T., Ikeda H., Okada T., Toyooka N., Fujimoto N., Matsunaga T., Ikari A.
Discovery and Structure-Based Optimization of Novel Atg4B Inhibitors for the Treatment of Castration-Resistant Prostate Cancer
Journal of Medicinal Chemistry
Yan S., Hodžić A., Bandini G., Yang G., Vanbeselaere J., Guérardel Y.
Characterization, Biosynthesis and Biological Functions of Novel Glyco-Epitopes
Frontiers in Molecular Biosciences
Akıl C., Ali S., Tran L.T., Gaillard J., Li W., Hayashida K., Hirose M., Kato T., Oshima A., Fujishima K., Blanchoin L., Narita A., Robinson R.C.
Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution
Science Advances
Oka N., Kanda M., Furuzawa M., Arai W., Ando K.
Synthesis of Truncated Carbocyclic Nucleosides Using 5′-Deoxy-5′-Heteroarylsulfonylnucleosides
Current Protocols
Seo N., Nakamura J., Kaneda T., Tateno H., Shimoda A., Ichiki T., Furukawa K., Hirabayashi J., Akiyoshi K., Shiku H.
Distinguishing functional exosomes and other extracellular vesicles as a nucleic acid cargo by the anion-exchange method
Journal of Extracellular Vesicles
Wang W., Okajima T., Takeuchi H.
Significant Roles of Notch O-Glycosylation in Cancer
Molecules
Hirata T., Kobayashi A., Furuse T., Yamada I., Tamura M., Tomita H., Tokoro Y., Ninomiya A., Fujihara Y., Ikawa M., Maeda Y., Murakami Y., Kizuka Y., Kinoshita T.
Loss of the N-acetylgalactosamine side chain of the GPI-anchor impairs bone formation and brain functions and accelerates the prion disease pathology
Journal of Biological Chemistry
Osuka R.F., Hirata T., Nagae M., Nakano M., Shibata H., Okamoto R., Kizuka Y.
N-acetylglucosaminyltransferase-V requires a specific noncatalytic luminal domain for its activity toward glycoprotein substrates
Journal of Biological Chemistry
Matsui Y., Abe Y., Uno K., Miyano S.
RoDiCE: Robust differential protein co-expression analysis for cancer complexome
Bioinformatics
Kuzuya M., Hirano H., Hayashida K., Watanabe M., Kobayashi K., Terada T., Mahmood M.I., Tama F., Tani K., Fujiyoshi Y., Oshima A.
Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids
Science Signaling
Shintani Y., Ohtomi T., Shibata A., Kitamura Y., Hirosawa K.M., Suzuki K.G.N., Ikeda M.
Formation of Supramolecular Nanostructures through in Situ Self-Assembly and Post-Assembly Modification of a Biocatalytically Constructed Dipeptide Hydrazide
Chemistry – A European Journal
Li F.J., Komura R., Nakashima C., Shimizu M., Kageyama K., Suga H.
Molecular Diagnosis of Thiophanate-Methyl-Resistant Strains of Fusarium fujikuroi in Japan
Plant Disease
Vu H., Muto Y., Hayashi M., Noguchi H., Tanaka K., Yamamoto Y.
Complete Genome Sequences of Three Phocaeicola vulgatus Strains Isolated from a Healthy Japanese Individual
Microbiology Resource Announcements
Oda M., Sano T., Kamatari Y.O., Abe Y., Ikura T., Ito N.
Structural Analysis of Hen Egg Lysozyme Refolded after Denaturation at Acidic pH
Protein Journal
Ozaki H., Asano T., Tanaka H.-N., Komura N., Ando H., Ishida H., Imamura A.
Blockwise synthesis of polylactosamine fragments and keratan sulfate oligosaccharides comprised of dimeric Galβ(1 → 4)GlcNAc6Sβ
Carbohydrate Research
Miyanishi W., Ojika M., Akase D., Aida M., Igarashi Y., Ito Y., Nakagawa Y.
D-Mannose binding, aggregation property, and antifungal activity of amide derivatives of pradimicin A
Bioorganic and Medicinal Chemistry
Suzuki H.I., Onimaru K.
Biomolecular condensates in cancer biology
Cancer Science
Sugiura S., Shintani Y., Mori D., Higashi S.L., Shibata A., Kitamura Y., Kawano S.-I., Hirosawa K.M., Suzuki K.G.N., Ikeda M.
Design of supramolecular hybrid nanomaterials comprising peptide-based supramolecular nanofibers and in situ generated DNA nanoflowers through rolling circle amplification
Nanoscale
Suzuki K., Nishio N., Kimura H., Tokura T., Kishi S., Ozaki N., Fujimoto Y., Sone M.
Comparison of quality of life and psychological distress in patients with tongue cancer undergoing a total/subtotal glossectomy or extended hemiglossectomy and free flap transfer: a prospective evaluation
International Journal of Oral and Maxillofacial Surgery
Lo T., Kushima I., Aleksic B., Yoshimi A., Someya T., Watanabe Y., Ozaki N.
Clinical manifestations of schizophrenia in four patients with variants in voltage-gated calcium channel-encoding genes: a case series
Psychiatry and Clinical Neurosciences
Ando H., Komura N., Tanaka H.-N., Imamura A., Ishida H.
Chemical synthesis of sialoglyco-architectures
Advances in Carbohydrate Chemistry and Biochemistry
Kato H., Kimura H., Kushima I., Takahashi N., Aleksic B., Ozaki N.
The genetic architecture of schizophrenia: review of large-scale genetic studies
Journal of Human Genetics
Ma C., Tsukamoto Y., Takeuchi H.
Generation of Properly Folded Epidermal Growth Factor-Like (EGF) Repeats and Glycosyltransferases Enables In Vitro O-Glycosylation
Methods in Molecular Biology
Yoshino S., Suzuki H.I.
The molecular understanding of super-enhancer dysregulation in cancer
Nagoya Journal of Medical Science
Kataoka K., Suzuki S., Tenno T., Goda N., Hibino E., Oshima A., Hiroaki H.
A cryptic phosphate-binding pocket on the SPFH domain of human stomatin that regulates a novel fibril-like self-assembly
Current Research in Structural Biology
Horii Y., Okadera K., Miyawaki S., Shiina T., Shimizu Y.
Suncus murinus as a novel model animal that is suitable for elucidating the mechanism of daily torpor
Biomedical Research (Japan)
Hu D., Hirabayashi J.
Transformation of Agrocybe cylindracea Galectin into αGalNAc-Specific Lectin
Methods in Molecular Biology
Nakagawa Y., Ito Y.
Mannose-binding analysis and biological application of pradimicins
Proceedings of the Japan Academy Series B: Physical and Biological Sciences
2021年
Tseng H.-C., Hsiao C.-T., Yamakawa N., Guérardel Y., Khoo K.-H.
Discovery Sulfoglycomics and Identification of the Characteristic Fragment Ions for High-Sensitivity Precise Mapping of Adult Zebrafish Brain–Specific Glycotopes
Frontiers in Molecular Biosciences
Oka N., Hirabayashi H., Kumada K., Ando K.
Synthesis of xanthosine 2-phosphate diesters via phosphitylation of the carbonyl group
Bioorganic and Medicinal Chemistry Letters
Hiraoka H., Shu Z., Tri Le B., Masuda K., Nakamoto K., Fangjie L., Abe N., Hashiya F., Kimura Y., Shimizu Y., Veedu R.N., Abe H.
Antisense Oligonucleotide Modified with Disulfide Units Induces Efficient Exon Skipping in mdx Myotubes through Enhanced Membrane Permeability and Nucleus Internalization
ChemBioChem
Oka N., Kanda M., Furuzawa M., Arai W., Ando K.
Serendipitous One-Step Synthesis of Cyclopentene Derivatives from 5′-Deoxy-5′-heteroarylsulfonylnucleosides as Nucleoside-Derived Julia-Kocienski Reagents
Journal of Organic Chemistry
Yamaoka K., Oikawa R., Abe N., Nakamoto K., Tomoike F., Hashiya F., Kimura Y., Abe H.
Completely Chemically Synthesized Long DNA Can be Transcribed in Human Cells
ChemBioChem
Hayakawa T., Terahara M., Fujito N.T., Matsunaga T., Teshima K.M., Hane M., Kitajima K., Sato C., Takahata N., Satta Y.
Lower promoter activity of the ST8SIA2 gene has been favored in evolving human collective brains
PLoS ONE
Ogami K., Suzuki H.I.
Nuclear rna exosome and pervasive transcription: Dual sculptors of genome function
International Journal of Molecular Sciences
Wu D., Arakawa H., Fujita A., Hashimoto H., Hibi M., Naruse K., Kamei Y., Sato C., Kitajima K.
A point-mutation in the C-domain of CMP-sialic acid synthetase leads to lethality of medaka due to protein insolubility
Scientific Reports
Nagai R., Sugimachi A., Tanimoto Y., Suzuki K.G.N., Hayashi F., Weikert D., Gmeiner P., Kasai R.S., Morigaki K.
Functional Reconstitution of Dopamine D2 Receptor into a Supported Model Membrane in a Nanometric Confinement
Advanced Biology
Yagi-Utsumi M., Aoki K., Watanabe H., Song C., Nishimura S., Satoh T., Yanaka S., Ganser C., Tanaka S., Schnapka V., Goh E.W., Furutani Y., Murata K., Uchihashi T., Arakawa K., Kato K.
Desiccation-induced fibrous condensation of CAHS protein from an anhydrobiotic tardigrade
Scientific Reports
Oka N., Suzuki K., Mori A., Ando K.
Stereoselective Synthesis of 1,2-cis-Glycosyl Sulfones and Their Application in One-Pot Julia Olefination for the Synthesis of exo-Glycals
European Journal of Organic Chemistry
Machino M., Gong Y., Ozaki T., Suzuki Y., Watanabe E., Imagama S., Kadomatsu K., Sakamoto K.
Dermatan sulphate is an activating ligand of anaplastic lymphoma kinase
Journal of Biochemistry
Inden M., Takagi A., Kitai H., Ito T., Kurita H., Honda R., Kamatari Y.O., Nozaki S., Wen X., Hijioka M., Kitamura Y., Hozumi I.
Kaempferol has potent protective and antifibrillogenic effects for α-synuclein neurotoxicity in vitro
International Journal of Molecular Sciences
Sivignon A., Yu S.-Y., Ballet N., Vandekerckove P., Barnich N., Guerardel Y.
Heteropolysaccharides from S. cerevisiae show anti-adhesive properties against E. coli associated with Crohn’s disease
Carbohydrate Polymers
Vibhute A.M., Komura N., Tanaka H.-N., Imamura A., Ando H.
Advanced Chemical Methods for Stereoselective Sialylation and Their Applications in Sialoglycan Syntheses
Chemical Record
Komura K., Inamoto T., Tsujino T., Matsui Y., Konuma T., Nishimura K., Uchimoto T., Tsutsumi T., Matsunaga T., Maenosono R., Yoshikawa Y., Taniguchi K., Tanaka T., Uehara H., Hirata K., Hirano H., Nomi H., Hirose Y., Ono F., Azuma H.
Increased BUB1B/BUBR1 expression contributes to aberrant DNA repair activity leading to resistance to DNA-damaging agents
Oncogene
Fukuo H., Suzuki T., Shimabukuro J., Komura N., Tanaka H.-N., Imamura A., Ishida H., Ando H.
Synthesis of Diverse Seleno-Glycolipids via the Transacetalization of Selenoacetals
European Journal of Organic Chemistry
Higashi S.L., Ikeda M.
Development of an Amino Sugar-Based Supramolecular Hydrogelator with Reduction Responsiveness
Journal of the American Chemical Society
Nakagawa Y., Kakihara S., Tsuzuki K., Ojika M., Igarashi Y., Ito Y.
A Pradimicin-Based Staining Dye for Glycoprotein Detection
Journal of Natural Products
Kawade H., Morise J., Mishra S.K., Tsujioka S., Oka S., Kizuka Y.
Tissue-specific regulation of hnk-1 biosynthesis by bisecting glcnac
Molecules
García-Jiménez M.J., Gil-Caballero S., Maza S., Corzana F., Juárez-Vicente F., Miles J.R., Sakamoto K., Kadomatsu K., García-Domínguez M., de Paz J.L., Nieto P.M.
Midkine Interaction with Chondroitin Sulfate Model Synthetic Tetrasaccharides and Their Mimetics: The Role of Aromatic Interactions
Chemistry – A European Journal
Miyazawa K., Itoh S.G., Watanabe H., Uchihashi T., Yanaka S., Yagi-Utsumi M., Kato K., Arakawa K., Okumura H.
Tardigrade Secretory-Abundant Heat-Soluble Protein Has a Flexible β-Barrel Structure in Solution and Keeps This Structure in Dehydration
Journal of Physical Chemistry B
Dasgupta B., Miyashita O., Uchihashi T., Tama F.
Reconstruction of Three-Dimensional Conformations of Bacterial ClpB from High-Speed Atomic-Force-Microscopy Images
Frontiers in Molecular Biosciences
Ohkawa Y., Kizuka Y., Takata M., Nakano M., Ito E., Mishra S.K., Akatsuka H., Harada Y., Taniguchi N.
Peptide sequence mapping around bisecting glcnac‐bearing n‐glycans in mouse brain
International Journal of Molecular Sciences
Nakano M., Hanashima S., Hara T., Kabayama K., Asahina Y., Hojo H., Komura N., Ando H., Nyholm T.K.M., Slotte J.P., Murata M.
FRET detects lateral interaction between transmembrane domain of EGF receptor and ganglioside GM3 in lipid bilayers
Biochimica et Biophysica Acta – Biomembranes
Ohashi S., Hashiya F., Abe H.
Variety of Nucleotide Polymerase Mutants Aiming to Synthesize Modified RNA
ChemBioChem
Shirakami N., Kawaki Y., Higashi S.L., Shibata A., Kitamura Y., Hanifah S.A., Wah L.L., Ikeda M.
Introduction of an Oxidation-responsive 4-Boronobenzyl Group into an Oligonucleotide through a Postmodification Approach
Chemistry Letters
Sakai S., Watanabe S., Komine O., Sobue A., Yamanaka K.
Novel reporters of mitochondria-associated membranes (MAM), MAMtrackers, demonstrate MAM disruption as a common pathological feature in amyotrophic lateral sclerosis
FASEB Journal
Takashima S., Takemoto S., Toyoshi K., Ohba A., Shimozawa N.
Zebrafish model of human Zellweger syndrome reveals organ-specific accumulation of distinct fatty acid species and widespread gene expression changes
Molecular Genetics and Metabolism
Kizuka Y.
The Involvement of Cellular Glycans in Alzheimer’s Disease
Comprehensive Glycoscience: Second Editition
Ohkawa Y., Kizuka Y., Harada Y., Taniguchi N.
Glycans in Chronic Obstructive Pulmonary Disease (COPD)
Comprehensive Glycoscience: Second Edition
Sakamoto K., Ozaki T., Kadomatsu K.
Axonal Regeneration by Glycosaminoglycan
Frontiers in Cell and Developmental Biology
Sheikh A.A.D., Akatsu C., Abdu-Allah H.H.M., Suganuma Y., Imamura A., Ando H., Takematsu H., Ishida H., Tsubata T.
The protein tyrosine phosphatase SHP-1 (PTPN6) but Not CD45 (PTPRC) is essential for the ligand-mediated regulation of CD22 in BCR-ligated b cells
Journal of Immunology
Sakamoto K., Ozaki T., Suzuki Y., Kadomatsu K.
Type IIa RPTPs and glycans: Roles in axon regeneration and synaptogenesis
International Journal of Molecular Sciences
Yang J., Hirata T., Liu Y.-S., Guo X.-Y., Gao X.-D., Kinoshita T., Fujita M.
Human SND2 mediates ER targeting of GPI-anchored proteins with low hydrophobic GPI attachment signals
FEBS Letters
Ito S., Ozaki T., Morozumi M., Imagama S., Kadomatsu K., Sakamoto K.
Enoxaparin promotes functional recovery after spinal cord injury by antagonizing PTPRσ
Experimental Neurology
Shirakami N., Higashi S.L., Kawaki Y., Kitamura Y., Shibata A., Ikeda M.
Construction of a reduction-responsive oligonucleotide via a post-modification approach utilizing 4-nitrophenyl diazomethane
Polymer Journal
Sato C., Kitajima K.
Polysialylation and disease
Molecular Aspects of Medicine
Huang Y.-F., Aoki K., Akase S., Ishihara M., Liu Y.-S., Yang G., Kizuka Y., Mizumoto S., Tiemeyer M., Gao X.-D., Aoki-Kinoshita K.F., Fujita M.
Global mapping of glycosylation pathways in human-derived cells
Developmental Cell
Yoshida Y., Honma M., Kimura Y., Abe H.
Structure, Synthesis and Inhibition Mechanism of Nucleoside Analogues as HIV-1 Reverse Transcriptase Inhibitors (NRTIs)
ChemMedChem
Kawanishi K., Saha S., Diaz S., Vaill M., Sasmal A., Siddiqui S.S., Choudhury B., Sharma K., Chen X., Schoenhofen I.C., Sato C., Kitajima K., Freeze H.H., Münster-Kühnel A., Varki A.
Evolutionary conservation of human ketodeoxynonulosonic acid production is independent of sialoglycan biosynthesis
Journal of Clinical Investigation
Ohtomi T., Higashi S.L., Mori D., Shibata A., Kitamura Y., Ikeda M.
Effect of side chain phenyl group on the self-assembled morphology of dipeptide hydrazides
Peptide Science
Barua R., Mizuno K., Tashima Y., Ogawa M., Takeuchi H., Taguchi A., Okajima T.
Bioinformatics and functional analyses implicate potential roles for EOGT and L-fringe in pancreatic cancers
Molecules
Gong Y., Abudureyimu S., Kadomatsu K., Sakamoto K.
Identification of PTPRσ-interacting proteins by proximity-labelling assay
Journal of Biochemistry
Saiki W., Ma C., Okajima T., Takeuchi H.
Current views on the roles of o‐glycosylation in controlling notch‐ligand interactions
Biomolecules
Vu H., Hayashi M., Nguyen T.N., Khong D.T., Tran H.T., Yamamoto Y., Tanaka K.
Comparison of Phenotypic and Genotypic Patterns of Antimicrobial-Resistant Bacteroides fragilis Group Isolated from Healthy Individuals in Vietnam and Japan
Infection and Drug Resistance
Onishi Y., Mise K., Kawakita C., Uchida H.A., Sugiyama H., Sugawara R., Yamaguchi S., Yoshida M., Mitsuhashi T., Yamada M., Hirabayashi J., Wada J.
Development of Urinary Diagnostic Biomarker for IgA Nephropathy by Lectin Microarray
American Journal of Nephrology
Jing L.F., Suga H.
Various methods for controlling the bakanae disease in rice
Reviews in Agricultural Science
Harada Y., Ohkawa Y., Maeda K., Kizuka Y., Taniguchi N.
Extracellular Vesicles and Glycosylation
Advances in Experimental Medicine and Biology
Hirata T., Kizuka Y.
N-Glycosylation
Advances in Experimental Medicine and Biology
Komata Y., Tsubota S., Sakamoto K., Ikematsu S., Kadomatsu K.
Screening of novel Midkine binding protein by BioID2-based proximity labeling
Nagoya Journal of Medical Science
Sakamoto K.
Regulation of axonal regeneration and its inhibition by glycan ligands
Trends in Glycoscience and Glycotechnology
Yamashita S., O. Kamatari Y., Honda R., Niwa A., Tomiata H., Hara A., Kuwata K.
Monomeric a-synuclein (aS) inhibits amyloidogenesis of human prion protein (hPrP) by forming a stable aS-hPrP hetero-dimer.
Prion
Nakagawa Y., Yamaji F., Miyanishi W., Ojika M., Igarashi Y., Ito Y.
Binding evaluation of pradimicins for oligomannose motifs from fungal mannans
Bulletin of the Chemical Society of Japan
Yoshimura A., Asahina Y., Chang L.-Y., Angata T., Tanaka H., Kitajima K., Sato C.
Identification and functional characterization of a Siglec-7 counter-receptor on K562 cells
Journal of Biological Chemistry
Nakato M., Shiranaga N., Tomioka M., Watanabe H., Kurisu J., Kengaku M., Komura N., Ando H., Kimura Y., Kioka N., Ueda K.
ABCA13 dysfunction associated with psychiatric disorders causes impaired cholesterol trafficking
Journal of Biological Chemistry
Kitano M., Kizuka Y., Sobajima T., Nakano M., Nakajima K., Misaki R., Itoyama S., Harada Y., Harada A., Miyoshi E., Taniguchi N.
Rab11-mediated post-Golgi transport of the sialyltransferase ST3GAL4 suggests a new mechanism for regulating glycosylation
Journal of Biological Chemistry
Oka N., Mori A., Suzuki K., Ando K.
Stereoselective Synthesis of Ribofuranoid exo-Glycals by One-Pot Julia Olefination Using Ribofuranosyl Sulfones
Journal of Organic Chemistry
Yoshimura A., Hatanaka R., Tanaka H., Kitajima K., Sato C.
The conserved arginine residue in all siglecs is essential for Siglec-7 binding to sialic acid
Biochemical and Biophysical Research Communications
Hashimoto M., Fukamizu A., Nakagawa T., Kizuka Y.
Roles of protein arginine methyltransferase 1 (PRMT1) in brain development and disease
Biochimica et Biophysica Acta – General Subjects
2020年
Higashi S.L., Hirosawa K.M., Suzuki K.G.N., Matsuura K., Ikeda M.
One-Pot Construction of Multicomponent Supramolecular Materials Comprising Self-Sorted Supramolecular Architectures of DNA and Semi-Artificial Glycopeptides
ACS Applied Bio Materials
Komura N., Suzuki K.G.N., Ando H., Konishi M., Hirose Y., Suganuma Y., Tanaka H.-N., Imamura A., Ishida H.
Development of fluorescent ganglioside GD3 and Gq1b analogs for elucidation of raft-associated interactions
Journal of Organic Chemistry
Yagami N., Vibhute A.M., Tanaka H.-N., Komura N., Imamura A., Ishida H., Ando H.
Stereoselective Synthesis of Diglycosyl Diacylglycerols with Glycosyl Donors Bearing a β-Stereodirecting 2,3-Naphthalenedimethyl Protecting Group
Journal of Organic Chemistry
Kitamura Y., Kandeel M., Kondo T., Tanaka A., Makino Y., Miyamoto N., Shibata A., Ikeda M., Kitade Y.
Sulfonamide antibiotics inhibit RNAi by binding to human Argonaute protein 2 PAZ
Bioorganic and Medicinal Chemistry Letters
Higashi S.L., Rozi N., Hanifah S.A., Ikeda M.
Supramolecular architectures of nucleic acid/peptide hybrids
International Journal of Molecular Sciences
Hirata T., Nagae M., Osuka R.F., Mishra S.K., Yamada M., Kizuka Y.
Recognition of glycan and protein substrates by N-acetylglucosaminyltransferase-V
Biochimica et Biophysica Acta – General Subjects
Hashiguchi H., Tsukamoto Y., Ogawa M., Tashima Y., Takeuchi H., Nakamura M., Kawashima H., Fujishiro M., Okajima T.
Glycoproteomic analysis identifies cryptdin-related sequence 1 as O-glycosylated protein modified with α1,2-fucose in the small intestine
Archives of Biochemistry and Biophysics
Yang Y., Murai R., Takahashi Y., Mori A., Hane M., Kitajima K., Sato C.
Comparative studies of polysialic acids derived from five different vertebrate brains
International Journal of Molecular Sciences
Ertunc N., Sato C., Kitajima K.
Sialic acid sulfation is induced by the antibiotic treatment in mammalian cells
Bioscience, Biotechnology and Biochemistry
Koyama-Honda I., Fujiwara T.K., Kasai R.S., Suzuki K.G.N., Kajikawa E., Tsuboi H., Tsunoyama T.A., Kusumi A.
High-speed single-molecule imaging reveals signal transduction by induced transbilayer raft phases
Journal of Cell Biology
Kawaguchi D., Kodama A., Abe N., Takebuchi K., Hashiya F., Tomoike F., Nakamoto K., Kimura Y., Shimizu Y., Abe H.
Phosphorothioate Modification of mRNA Accelerates the Rate of Translation Initiation to Provide More Efficient Protein Synthesis
Angewandte Chemie – International Edition
Ma C., Takeuchi H., Hao H., Yonekawa C., Nakajima K., Nagae M., Okajima T., Haltiwanger R.S., Kizuka Y.
Differential labeling of glycoproteins with alkynyl fucose analogs
International Journal of Molecular Sciences
Mori A., Yang Y., Takahashi Y., Hane M., Kitajima K., Sato C.
Combinational analyses with multiple methods reveal the existence of several forms of polysialylated neural cell adhesion molecule in mouse developing brains
International Journal of Molecular Sciences
Tomida H., Matsuhashi T., Tanaka H.-N., Komura N., Ando H., Imamura A., Ishida H.
Indirect synthetic route to α-l-fucosides: Via highly stereoselective construction of α-l-galactosides followed by C6-deoxygenation
Organic and Biomolecular Chemistry
Nobeyama T., Shigyou K., Nakatsuji H., Sugiyama H., Komura N., Ando H., Hamada T., Murakami T.
Control of Lipid Bilayer Phases of Cell-Sized Liposomes by Surface-Engineered Plasmonic Nanoparticles
Langmuir
Tomida S., Takata M., Hirata T., Nagae M., Nakano M., Kizuka Y.
The SH3 domain in the fucosyltransferase FUT8 controls FUT8 activity and localization and is essential for core fucosylation
Journal of Biological Chemistrydoi:
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