ARCHIVEMENTS
2023
Fujiwara T.K.; Takeuchi S.; Kalay Z.; Nagai Y.; Tsunoyama T.A.; Kalkbrenner T.; Iwasawa K.; Ritchie K.P.; Suzuki K.G.N.; Kusumi A.
Development of ultrafast camera-based single fluorescent-molecule imaging for cell biology
Journal of Cell Biology
Kobayashi J.; Wen R.; Nishikawa T.; Nunomura Y.; Suzuki T.; Sejima Y.; Gokan T.; Furukawa M.; Yokota T.; Osawa N.; Sato Y.; Nibu Y.; Mizutani T.; Oba M.
Natto extract inhibits infection caused by the Aujeszky’s disease virus in mice
Microbiology and Immunology
Ta H.P.; Clarisse C.; Maes E.; Yamakawa N.; Guérardel Y.; Krzewinski F.; Zarzycka W.; Touboul D.; Girardeau A.; Fonseca F.; Kermarrec A.; Viau M.; Riaublanc A.; Ropers M.H.
Membrane lipid composition of Carnobacterium maltaromaticum CNCM I-3298, a highly cryoresistant lactic bacterium
Chemistry and Physics of Lipids
Lo T.; Kushima I.; Kimura H.; Aleksic B.; Okada T.; Kato H.; Inada T.; Nawa Y.; Torii Y.; Yamamoto M.; Kimura R.; Funabiki Y.; Kosaka H.; Numata S.; Kasai K.; Sasaki T.; Yokoyama S.; Munesue T.; Hashimoto R.; Yasuda Y.; Fujimoto M.; Usami M.; Itokawa M.; Arai M.; Ohi K.; Someya T.; Watanabe Y.; Egawa J.; Takahashi T.; Suzuki M.; Yamasue H.; Iwata N.; Ikeda M.; Ozaki N.
Association between copy number variations in parkin (PRKN) and schizophrenia and autism spectrum disorder: A case–control study
Neuropsychopharmacology Reports
Watanabe S.; Murata Y.; Oka Y.; Oiwa K.; Horiuchi M.; Iguchi Y.; Komine O.; Sobue A.; Katsuno M.; Ogi T.; Yamanaka K.
Mitochondria-associated membrane collapse impairs TBK1-mediated proteostatic stress response in ALS
Proceedings of the National Academy of Sciences of the United States of America
Senju C.; Nakazawa Y.; Oso T.; Shimada M.; Kato K.; Matsuse M.; Tsujimoto M.; Masaki T.; Miyazaki Y.; Fukushima S.; Tateishi S.; Utani A.; Murota H.; Tanaka K.; Mitsutake N.; Moriwaki S.; Nishigori C.; Ogi T.
Deep intronic founder mutations identified in the ERCC4/XPF gene are potential therapeutic targets for a high-frequency form of xeroderma pigmentosum
Proceedings of the National Academy of Sciences of the United States of America
Hayakawa K.; Hane M.; Hamagami H.; Imai M.; Tanaka H.; Kitajima K.; Sato C.
Interactions between polysialic acid and dopamine-lead compounds as revealed by biochemical and in silico docking simulation analyses
Glycoconjugate Journal
Hagino R.; Mozaki K.; Komura N.; Imamura A.; Ishida H.; Ando H.; Tanaka H.-N.
Synthetic Approaches to Ribosyl Adenosine 5′,5′′-Diphosphate Fragment of Poly(ADP-ribose)
European Journal of Organic Chemistry
Ohkawa Y.; Kanto N.; Nakano M.; Fujinawa R.; Kizuka Y.; Johnson E.L.; Harada Y.; Tamura J.-I.; Taniguchi N.
Involvement of langerin in the protective function of a keratan sulfate-based disaccharide in an emphysema mouse model
Journal of Biological Chemistry
Irie K.; Oda Y.; Sumikama T.; Oshima A.; Fujiyoshi Y.
The structural basis of divalent cation block in a tetrameric prokaryotic sodium channel
Nature Communications
Arafuka S.; Fujishiro H.; Torii Y.; Sekiguchi H.; Habuchi C.; Miwa A.; Yoshida M.; Iritani S.; Iwasaki Y.; Ikeda M.; Ozaki N.
Neuropathological substrate of incident dementia in older patients with schizophrenia: A clinicopathological study
Psychiatry and Clinical Neurosciences
Kato D.; Aoyama Y.; Nishida K.; Takahashi Y.; Sakamoto T.; Takeda I.; Tatematsu T.; Go S.; Saito Y.; Kunishima S.; Cheng J.; Hou L.; Tachibana Y.; Sugio S.; Kondo R.; Eto F.; Sato S.; Moorhouse A.J.; Yao I.; Kadomatsu K.; Setou M.; Wake H.
Regulation of lipid synthesis in myelin modulates neural activity and is required for motor learning
GLIA
Murao M.; Kato R.; Kusano S.; Hisamatsu R.; Endo H.; Kawabata Y.; Kimura S.; Sato A.; Mori H.; Itami K.; Torii K.U.; Hagihara S.; Uchida N.
A Small Compound, HYGIC, Promotes Hypocotyl Growth Through Ectopic Ethylene Response
Plant and Cell Physiology
Carnielli C.M.; de Lima Morais T.M.; de Sá Patroni F.M.; Ribeiro A.C.P.; Brandão T.B.; Sobroza E.; Matos L.L.; Kowalski L.P.; Leme A.F.P.; Kawahara R.; Thaysen-Andersen M.
Comprehensive Glycoprofiling of Oral Tumors Associates N-Glycosylation With Lymph Node Metastasis and Patient Survival
Molecular and Cellular Proteomics
Furukawa S.; Kushima I.; Aleksic B.; Ozaki N.
Case reports of two siblings with autism spectrum disorder and 15q13.3 deletions
Neuropsychopharmacology Reports
Jilani N.A.K.; Oka N.; Ando K.; Hasbullah S.A.
Synthesis, Characterisation and Binding Evaluation of New 6-Amidinoindole Compound as the Potential Heme Binder; [Sintesis, Pencirian dan Penilaian Pengikatan Sebatian 6-Amidinoindol Baharu sebagai Pengikat Heme Berpotensi]
Sains Malaysiana
Ohkawa Y.; Kitano M.; Maeda K.; Nakano M.; Kanto N.; Kizuka Y.; Seike M.; Azuma A.; Yamaguchi Y.; Ookawara T.; Miyoshi E.; Taniguchi N.
Core Fucosylation Is Required for the Secretion of and the Enzymatic Activity of SOD3 in Nonsmall-Cell Lung Cancer Cells
Antioxidants and Redox Signaling
Farshadyeganeh P.; Nazim M.; Zhang R.; Ohkawara B.; Nakajima K.; Rahman M.A.; Nasrin F.; Ito M.; Takeda J.-I.; Ohe K.; Miyasaka Y.; Ohno T.; Masuda A.; Ohno K.
Splicing regulation of GFPT1 muscle-specific isoform and its roles in glucose metabolisms and neuromuscular junction
iScience
Inagaki M., Abe N., Li Z., Nakashima Y., Acharyya S., Ogawa K., Kawaguchi D., Hiraoka H., Banno A., Meng Z., Tada M., Ishida T., Lyu P., Kokubo K., Murase H., Hashiya F., Kimura Y., Uchida S., Abe H.
Cap analogs with a hydrophobic photocleavable tag enable facile purification of fully capped mRNA with various cap structures
Nature Communications
Sobue A., Komine O., Yamanaka K.
Neuroinflammation in Alzheimer’s disease: microglial signature and their relevance to disease
Inflammation and Regeneration
Kimura H., Kishi S., Narita H., Tanaka T., Okada T., Fujisawa D., Sugita N., Noma S., Matsumoto Y., Ohashi A., Mitsuyasu H., Yoshida K., Kawasaki H., Nishimura K., Ogura Y., Ozaki N.
Comorbid psychiatric disorders and long-term survival after liver transplantation in transplant facilities with a psychiatric consultation-liaison team: a multicenter retrospective study
BMC Gastroenterology
Yamauchi K., Soyano M., Kobayashi M., Kamatari Y.O., Mitsunaga T.
Protein aggregation model to explain the bioactivity of condensed tannins
Food Chemistry
Suzuki K., Nishio N., Kimura H., Tokura T., Kishi S., Ozaki N., Fujimoto Y., Sone M.
Comparison of quality of life and psychological distress in patients with tongue cancer undergoing a total/subtotal glossectomy or extended hemiglossectomy and free flap transfer: a prospective evaluation
International Journal of Oral and Maxillofacial Surgery
Ikazaki T., Ishikawa E., Tamashima H., Akiyama H., Kimuro Y., Yoritate M., Matoba H., Imamura A., Ishida H., Yamasaki S., Hirai G.
Ligand-Controlled Stereoselective Synthesis and Biological Activity of 2-Exomethylene Pseudo-glycoconjugates: Discovery of Mincle-Selective Ligands
Angewandte Chemie – International Edition
Kozai D., Numoto N., Nishikawa K., Kamegawa A., Kawasaki S., Hiroaki Y., Irie K., Oshima A., Hanzawa H., Shimada K., Kitano Y., Fujiyoshi Y.
Recognition Mechanism of a Novel Gabapentinoid Drug, Mirogabalin, for Recombinant Human α2δ1, a Voltage-Gated Calcium Channel Subunit: Recognition mechanism of mirogabalin for α2δ1
Journal of Molecular Biology
Nishiguchi S., Kasai R.S., Uchihashi T.
Antiparallel dimer structure of CELSR cadherin in solution revealed by high-speed-atomic force microscopy
Proceedings of the National Academy of Sciences of the United States of America
Asano T., Udagawa T., Komura N., Imamura A., Ishida H., Ando H., Tanaka H.-N.
Unprecedented neighboring group participation of C2 N-imidoxy functionalities for 1,2-trans-selective glycosylation
Carbohydrate Research
Kusumi A., Tsunoyama T.A., Tang B., Hirosawa K.M., Morone N., Fujiwara T.K., Suzuki K.G.N.
Cholesterol- and actin-centered view of the plasma membrane: updating the Singer-Nicolson fluid mosaic model to commemorate its 50th anniversary
Molecular biology of the cell
Sugiura K., Kawai Y., Yamamoto A., Yoshioka H., Kiyohara Y., Iida A., Ozawa Y., Nishikawa M., Miura N., Hanamatsu H., Furukawa J.-I., Shinohara Y.
Exposure to brefeldin A induces unusual expression of hybrid- and complex-type free N-glycans in HepG2 cells
Biochimica et Biophysica Acta – General Subjects
Liu Y.-S., Wang Y., Zhou X., Zhang L., Yang G., Gao X.-D., Murakami Y., Fujita M., Kinoshita T.
Accumulated precursors of specific GPI-anchored proteins upregulate GPI biosynthesis with ARV1
The Journal of cell biology
Kondo Y., Okajima T.
Inhibitory machinery for the functional dystroglycan glycosylation
Journal of biochemistry
Minami S., Niwa T., Uemura E., Koike R., Taguchi H., Ota M.
Prediction of chaperonin GroE substrates using small structural patterns of proteins
FEBS Open Bio
Hanamatsu H., Miura Y., Nishikaze T., Yokota I., Homan K., Onodera T., Hayakawa Y., Iwasaki N., Furukawa J.-I.
Simultaneous and sialic acid linkage-specific N- and O-linked glycan analysis by ester-to-amide derivatization
Glycoconjugate Journal
Chau T.H., Chernykh A., Kawahara R., Thaysen-Andersen M.
Critical considerations in N-glycoproteomics
Current Opinion in Chemical Biology
Watanabe S., Horiuchi M., Murata Y., Komine O., Kawade N., Sobue A., Yamanaka K.
Sigma-1 receptor maintains ATAD3A as a monomer to inhibit mitochondrial fragmentation at the mitochondria-associated membrane in amyotrophic lateral sclerosis
Neurobiology of Disease
Nakajo T., Kusaka S., Hiraoka H., Nomura K., Matsubara N., Baba R., Yoshida Y., Nakamoto K., Honma M., Iguchi H., Uchihashi T., Abe H., Matsuda R.
Creation of single molecular conjugates of metal-organic cages and DNA
Chemical Communications
Kato H., Kimura H., Kushima I., Takahashi N., Aleksic B., Ozaki N.
The genetic architecture of schizophrenia: review of large-scale genetic studies
Journal of Human Genetics
Sorin M.N., Di Maio A., Silva L.M., Ebert D., Delannoy C.P., Nguyen N.-K., Guerardel Y., Chai W., Halary F., Renaudin-Autain K., Liu Y., Bressollette-Bodin C., Stehle T., McIlroy D.
Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus
Cell Reports
Soon J.W., Oohora K., Uchihashi T., Hayashi T.
Disulfide Bond-mediated Oligomerization of a Green Fluorescent Protein in Solution
Chemistry Letters
Rahman M.M., Nakanishi R., Tsukada F., Takashima S., Wakihara Y., Kamatari Y.O., Shimizu K., Okada A., Inoshima Y.
Identification of Suitable Internal Control miRNAs in Bovine Milk Small Extracellular Vesicles for Normalization in Quantitative Real-Time Polymerase Chain Reaction
Membranes
Anbo H., Sakuma K., Fukuchi S., Ota M.
How AlphaFold2 Predicts Conditionally Folding Regions Annotated in an Intrinsically Disordered Protein Database, IDEAL
Biology
Saitoh S., Takaki T., Nakajima K., Wo B., Terashima H., Shimo S., Nguyen H.B., Thai T.Q., Kumamoto K., Kunisawa K., Nagao S., Tojo A., Ohno N., Takahashi K.
Treatment of tubular damage in high-fat-diet-fed obese mice using sodium-glucose cotransporter inhibitors
PLoS ONE
Suzuki K.G.N., Kusumi A.
Refinement of Singer-Nicolson fluid-mosaic model by microscopy imaging: Lipid rafts and actin-induced membrane compartmentalization
Biochimica et Biophysica Acta – Biomembranes
Abe J., Takeda Y., Kikuma T., Kizuka Y., Kajiura H., Kajihara Y., Ito Y.
Squaryl group-modified UDP analogs as inhibitors of the endoplasmic reticulum-resident folding sensor enzyme UGGT
Chemical Communications
Nakagawa T., Iwaki Y., Wu D., Hane M., Sato C., Kitajima K.
Identification and characterization of a deaminoneuraminic acid (Kdn)-specific aldolase from Sphingobacterium species
Glycobiology
Yamashita H., Komine O., Fujimori-Tonou N., Yamanaka K.
Comprehensive expression analysis with cell-type-specific transcriptome in ALS-linked mutant SOD1 mice: Revisiting the active role of glial cells in disease
Frontiers in Cellular Neuroscience
Hasegawa S., Inagaki M., Kato S., Li Z., Kimura Y., Abe H.
Synthesis of nucleoside oligophosphates by electrophilic activation of phosphorothioate
Organic and Biomolecular Chemistry
Suzuki K.G.N., Komura N., Ando H.
Recently developed glycosphingolipid probes and their dynamic behavior in cell plasma membranes as revealed by single-molecule imaging
Glycoconjugate Journal
Kimura H., Kushima I., Banno M., Inada T., Yoshimi A., Aleksic B., Ozaki N.
Clinical characterization of patients with schizophrenia and 16p13.11 duplication: A case series
Neuropsychopharmacology Reports
Kawamata M., Suzuki H.I., Kimura R., Suzuki A.
Optimization of Cas9 activity through the addition of cytosine extensions to single-guide RNAs
Nature Biomedical Engineering
Arioka Y., Okumura H., Sakaguchi H., Ozaki N.
Shedding light on latent pathogenesis and pathophysiology of mental disorders: the potential of iPS cell technology
Psychiatry and Clinical Neurosciences
Miyake N., Tsurusaki Y., Fukai R., Kushima I., Okamoto N., Ohashi K., Nakamura K., Hashimoto R., Hiraki Y., Son S., Kato M., Sakai Y., Osaka H., Deguchi K., Matsuishi T., Takeshita S., Fattal-Valevski A., Ekhilevitch N., Tohyama J., Yap P., Keng W.T., Kobayashi H., Takubo K., Okada T., Saitoh S., Yasuda Y., Murai T., Nakamura K., Ohga S., Matsumoto A., Inoue K., Saikusa T., Hershkovitz T., Kobayashi Y., Morikawa M., Ito A., Hara T., Uno Y., Seiwa C., Ishizuka K., Shirahata E., Fujita A., Koshimizu E., Miyatake S., Takata A., Mizuguchi T., Ozaki N., Matsumoto N.
Molecular diagnosis of 405 individuals with autism spectrum disorder
European Journal of Human Genetics
Yamanaka K.
Neuroinflammation in neurodegenerative disease
Nagoya Journal of Medical Science
Maekawa K., Yamanaka K.
Role of sex hormones in neuroinflammation in Alzheimer’s disease
Clinical and Experimental Neuroimmunology
Chau T.H., Chernykh A., Ugonotti J., Parker B.L., Kawahara R., Thaysen-Andersen M.
Glycomics-Assisted Glycoproteomics Enables Deep and Unbiased N-Glycoproteome Profiling of Complex Biological Specimens
Methods in molecular biology (Clifton, N.J.)
Uegaki R., Uchino H., Wasada H., Suga H.
Fumonisin reduction using fungicides in forage corn cultivation
Grassland Science
Wakayama K., Kimura S., Kobatake Y., Kamishina H., Nishii N., Takashima S., Honda R., Kamatari Y.O.
Molecular Mechanisms of Aggregation of Canine SOD1 E40K Amyloidogenic Mutant Protein
Molecules
Hamajima S., Komura N., Tanaka H.-N., Imamura A., Ishida H., Ichiyanagi T., Ando H.
Investigation of the Protection of the C4 Hydroxyl Group in Macrobicyclic Kdo Donors
Molecules
Lo T., Kushima I., Aleksic B., Yoshimi A., Someya T., Watanabe Y., Ozaki N.
Clinical manifestations of schizophrenia in four patients with variants in voltage-gated calcium channel-encoding genes: a case series
Psychiatry and Clinical Neurosciences
Matsuo Y., Uchihashi T., Inada T.
Decoding of the ubiquitin code for clearance of colliding ribosomes by the RQT complex
Nature Communications
Omoto T., Wu D., Maruyama E., Tajima K., Hane M., Sato C., Kitajima K.
Forced expression of α2,3-sialyltransferase IV rescues impaired heart development in α2,6-sialyltransferase I-deficient medaka
Biochemical and Biophysical Research Communications
Yokoyama S., Hayashi M., Goto T., Muto Y., Tanaka K.
Identification of cfxA gene variants and susceptibility patterns in β-lactamase-producing Prevotella strains
Anaerobe
Okawa R., Hayashi Y., Yamashita Y., Matsubayashi Y., Ogawa-Ohnishi M.
Arabinogalactan protein polysaccharide chains are required for normal biogenesis of plasmodesmata
Plant Journal
Hayasaka R., Tabata S., Hasebe M., Ikeda S., Hikita T., Oneyama C., Yoshitake J., Onoshima D., Takahashi K., Shibata T., Uchida K., Baba Y., Soga T., Tomita M., Hirayama A.
Metabolomics of small extracellular vesicles derived from isocitrate dehydrogenase 1-mutant HCT116 cells collected by semi-automated size exclusion chromatography
Frontiers in Molecular Biosciences
Yamashita H., Komine O., Fujimori-Tonou N., Yamanaka K.
Comprehensive expression analysis with cell-type-specific transcriptome in ALS-linked mutant SOD1 mice: Revisiting the active role of glial cells in disease
Frontiers in Cellular Neuroscience
Nakagawa Y.
Recent Progress in the Development and Application of Lectin Mimics
Trends in Glycoscience and Glycotechnology
Hane M.
Sialoglycomic Analysis Using Sialic Acid Recognition Molecules as Probes
Trends in Glycoscience and Glycotechnology
Sugiyama Y., Uno K., Matsui Y.
Types of anomalies in two-dimensional videobased gait analysis in uncontrolled environments
PLoS Computational Biology
Suganuma Y., Imamura A., Ando H., Kiso M., Takematsu H., Tsubata T., Ishida H.
Improved synthesis of CD22-binding sialosides and its application for further development of potent CD22 inhibitors
Glycoconjugate Journal
Yamaguchi E., Komura N., Tanaka H.-N., Imamura A., Ishida H., Groux-Degroote S., Mühlenhoff M., Suzuki K.G.N., Ando H.
Fluorescent GD2 analog for single-molecule imaging
Glycoconjugate Journal
Fu B., Wu D., Yasumasu S., Hane M., Sato C., Kitajima K.
Critical Role of the Cortical Alveolus Protease Alveolin in Chorion Hardening In Vivo at Medaka Fertilization
Biomolecules
Komatsu S., Kitai H., Suzuki H.I.
Network Regulation of microRNA Biogenesis and Target Interaction
Cells
Imamura A., Ando H., Ishida H.
Chemical Synthesis of Gangliosides
Methods in Molecular Biology
Hanamatsu H., Nishikaze T., Furukawa J.-I.
Comprehensive Glycan Analysis of Sphingolipids in Human Serum/Plasma
Methods in Molecular Biology
Suzuki K.G.N.
Single-Molecule Imaging of Ganglioside Probes in Living Cell Plasma Membranes
Methods in Molecular Biology
Hanamatsu H., Makino S., Ohara M., Suda G., Yokota I., Nishihara S., Sakamoto N., Furukawa J.-I.
Simultaneous determination of heparan sulfate, chondroitin/dermatan sulfates, and hyaluronan glycosaminoglycan disaccharides by high-performance liquid chromatography using a reverse-phase column with adamantyl groups
Journal of Chromatography A
https://doi.org/10.1016/j.chroma.2022.463748Hirata T., Harada Y., Hirosawa K.M., Tokoro Y., Suzuki K.G.N., Kizuka Y.
N-acetylglucosaminyltransferase-V (GnT-V)-enriched small extracellular vesicles mediate N-glycan remodeling in recipient cells
iScience
https://doi.org/10.1016/j.isci.2022.105747Suzuki K.G.N., Kusumi A.
Refinement of Singer-Nicolson fluid-mosaic model by microscopy imaging: Lipid rafts and actin-induced membrane compartmentalization
Biochimica et Biophysica Acta – Biomembranes
https://doi.org/10.1016/j.bbamem.2022.184093Ren W.-W., Fujita M.
Simple N-Glycan Profile Analysis Using Lectin Staining, Mass Spectrometry, and GlycoMaple
Methods in Molecular Biology
https://doi.org/10.1007/978-1-0716-2639-9_41Li F., Ebihara A., Sakahara Y., Matsumoto S., Ueno R., Bao W., Kimura M., Fuji S.-I., Shimizu M., Kageyama K., Suga H.
Synergistic effect of amino acid substitutions in CYP51B for prochloraz resistance in Fusarium fujikuroi
Pesticide Biochemistry and Physiology
https://doi.org/10.1016/j.pestbp.2022.105291Inokuchi J.-I., Go S., Hirabayashi Y.
Synthesis of O-Linked Glycoconjugates in the Nervous System
Advances in Neurobiology
https://doi.org/10.1007/978-3-031-12390-0_4
2022
Yasuda T., Watanabe H., Hirosawa K.M., Suzuki K.G.N., Suga K., Hanashima S.
Fluorescence Spectroscopic Analysis of Lateral and Transbilayer Fluidity of Exosome Membranes
Langmuir
https://doi.org/10.1021/acs.langmuir.2c02258
Hamajima S., Komura N., Tanaka H.-N., Imamura A., Ishida H., Noguchi H., Ichiyanagi T., Ando H.
Full Stereocontrol in α-Glycosidation of 3-Deoxy- d – Manno-2-octulosonic Acid (Kdo) Using Macrobicyclic Glycosyl Donors
Organic Letters
Tomida S., Nagae M., Kizuka Y.
The stem region of α1,6-fucosyltransferase FUT8 is required for multimer formation but not catalytic activity
Journal of Biological Chemistry
Kitai H., Kato N., Ogami K., Komatsu S., Watanabe Y., Yoshino S., Koshi E., Tsubota S., Funahashi Y., Maeda T., Furuhashi K., Ishimoto T., Kosugi T., Maruyama S., Kadomatsu K., Suzuki H.I.
Systematic characterization of seed overlap microRNA cotargeting associated with lupus pathogenesis
BMC Biology
Suzuki K., Tange M., Yamagishi R., Hanada H., Mukai S., Sato T., Tanaka T., Akashi T., Kadomatsu K., Maeda T., Miida T., Takeuchi I., Murakami H., Sekido Y., Murakami-Tonami Y.
SMG6 regulates DNA damage and cell survival in Hippo pathway kinase LATS2-inactivated malignant mesothelioma
Cell Death Discovery
Mizobuchi K., Kushima I., Kato H., Miyajima M., Kimura H., Ozaki N.
Turner syndrome presenting with idiopathic regression: A case report
Psychiatry and Clinical Neurosciences
Chantarasrivong C., Okada R., Yamane Y., Yang X., Higuchi Y., Konishi M., Komura N., Ando H., Yokokawa R., Yamashita F.
Disposition of E-selectin-targeting liposomes in tumor spheroids with a perfusable vascular network
Drug Metabolism and Pharmacokinetics
Kushima I., Aleksic B., Kimura H., Nakatochi M., Lo T., Ikeda M., Arai M., Hashimoto R., Numata S., Okamura Y., Obara T., Inada T., Ozaki N.
X chromosome aneuploidies and schizophrenia: association analysis and phenotypic characterization
Psychiatry and Clinical Neurosciences
Kawashima N., Naito S., Hanamatsu H., Nagane M., Takeuchi Y., Furukawa J.-I., Iwasaki N., Yamashita T., Nakayama K.-I.
Glycosphingolipid GM3 prevents albuminuria and podocytopathy induced by anti-nephrin antibody
Scientific Reports
Young V.C., Nakanishi H., Meyer D.J., Nishizawa T., Oshima A., Artigas P., Abe K.
Structure and function of H+/K+ pump mutants reveal Na+/K+ pump mechanisms
Nature Communications
Kizuka Y.
Metabolic utilization and remodeling of glycan biosynthesis using fucose analogs
Biochimica et Biophysica Acta – General Subjects
Yang Y., Liu G., Li F., Carey L.B., Sun C., Ling K., Tachikawa H., Fujita M., Gao X.-D., Nakanishi H.
Receptor for advanced glycation end-products (RAGE) mediates phagocytosis in nonprofessional phagocytes
Communications Biology
Shimamura Y., Furuhashi K., Tanaka A., Karasawa M., Nozaki T., Komatsu S., Watanabe K., Shimizu A., Minatoguchi S., Matsuyama M., Sawa Y., Tsuboi N., Ishimoto T., Suzuki H.I., Maruyama S.
Mesenchymal stem cells exert renoprotection via extracellular vesicle-mediated modulation of M2 macrophages and spleen-kidney network
Communications Biology
Ertunc N., Phitak T., Wu D., Fujita H., Hane M., Sato C., Kitajima K.
Sulfation of sialic acid is ubiquitous and essential for vertebrate development
Scientific Reports
Nagae M., Hirata T., Tateno H., Mishra S.K., Manabe N., Osada N., Tokoro Y., Yamaguchi Y., Doerksen R.J., Shimizu T., Kizuka Y.
Discovery of a lectin domain that regulates enzyme activity in mouse N-acetylglucosaminyltransferase-IVa (MGAT4A)
Communications Biology
Suzuki S., Iida M., Hiroaki Y., Tanaka K., Kawamoto A., Kato T., Oshima A.
Structural insight into the activation mechanism of MrgD with heterotrimeric Gi-protein revealed by cryo-EM
Communications Biology
Kimura H., Nakatochi M., Aleksic B., Guevara J., Toyama M., Hayashi Y., Kato H., Kushima I., Morikawa M., Ishizuka K., Okada T., Tsurusaki Y., Fujita A., Miyake N., Ogi T., Takata A., Matsumoto N., Buxbaum J., Ozaki N., Sebat J.
Exome sequencing analysis of Japanese autism spectrum disorder case-control sample supports an increased burden of synaptic function-related genes
Translational Psychiatry
Imai Y., Iida M., Kanie K., Katsuno M., Kato R.
Label-free morphological sub-population cytometry for sensitive phenotypic screening of heterogenous neural disease model cells
Scientific Reports
Huang S., Haga Y., Li J., Zhang J., Kweon H.K., Seino J., Hirayama H., Fujita M., Moremen K.W., Andrews P., Suzuki T., Wang Y.
Mitotic phosphorylation inhibits the Golgi mannosidase MAN1A1
Cell Reports
Ohyama Y., Yamaguchi H., Ogata S., Chiurlia S., Cox S.N., Kouri N.-M., Stangou M.J., Nakajima K., Hayashi H., Inaguma D., Hasegawa M., Yuzawa Y., Tsuboi N., Renfrow M.B., Novak J., Papagianni A.A., Schena F.P., Takahashi K.
Racial heterogeneity of IgA1 hinge-region O-glycoforms in patients with IgA nephropathy
iScience
Kondoh K., Akahori H., Muto Y., Terada T.
Identification of Key Genes and Pathways Associated with Preeclampsia by a WGCNA and an Evolutionary Approach
Genes
Nagao H., Ninomiya M., Sugiyama H., Itabashi A., Uno K., Tanaka K., Koketsu M.
Comparative analysis of p-terphenylquinone and seriniquinone derivatives as reactive oxygen species-modulating agents
Bioorganic and Medicinal Chemistry Letters
Tsutsumi N., Ito A., Niko Y., Bando Y., Takahashi K., Ikeda M., Yoneyama K., Nakamura T., Izumi M., Ochi R.
Glycolipid-Type Amphiphiles with a Small Anilinochloromaleimide-Based Luminogen Exhibiting Aggregation-Induced Emission
ChemistrySelect
Chan F.-Y., Kurosaki R., Ganser C., Takeda T., Uchihashi T.
Tip-scan high-speed atomic force microscopy with a uniaxial substrate stretching device for studying dynamics of biomolecules under mechanical stress
Review of Scientific Instruments
Miura N., Hanamatsu H., Yokota I., Akasaka-Manya K., Manya H., Endo T., Shinohara Y., Furukawa J.-I.
Toolbox Accelerating Glycomics (TAG): Improving Large-Scale Serum Glycomics and Refinement to Identify SALSA-Modified and Rare Glycans
International Journal of Molecular Sciences
Zhang A., Tsukamoto Y., Takeuchi H., Nishiwaki K., Tashima Y., Okajima T.
Secretory expression of mammalian NOTCH tandem epidermal growth factor-like repeats based on increased O-glycosylation
Analytical Biochemistry
Miyakawa K., Miyashita N., Horie M., Terasaki Y., Tanaka H., Urushiyama H., Fukuda K., Okabe Y., Ishii T., Kuwahara N., Suzuki H.I., Nagase T., Saito A.
ASCL1 regulates super-enhancer-associated miRNAs to define molecular subtypes of small cell lung cancer
Cancer Science
Lyu F., An S., Kobayashi Y., Nomura K., Baba R., Abe N., Hiraoka H., Hashiya F., Shu Z., Ui-Tei K., Kimura Y., Abe H.
A 2′-modified uridine analog, 2′-O-(methylthiomethoxy)methyl uridine, for siRNA applications
Bioorganic and Medicinal Chemistry Letters
Yoshitake J., Azami M., Sei H., Onoshima D., Takahashi K., Hirayama A., Uchida K., Baba Y., Shibata T.
Rapid Isolation of Extracellular Vesicles Using a Hydrophilic Porous Silica Gel-Based Size-Exclusion Chromatography Column
Analytical Chemistry
Suga H., Hayashi M., Kushiro M., Miyano N., Inoue H., Nakajima K., Kawakami T., Tonooka T., Nakajima T., Shimizu M., Kageyama K.
A Novel Medium for Isolating Two Japanese Species in the Fusarium graminearum Species Complex and a Dipstick DNA Chromatography Assay for Species Identification and Trichothecene Typing
Journal of Fungi
Hirata T., Yang J., Tomida S., Tokoro Y., Kinoshita T., Fujita M., Kizuka Y.
ER entry pathway and glycosylation of GPI-anchored proteins are determined by N-terminal signal sequence and C-terminal GPI-attachment sequence
Journal of Biological Chemistry
Yamamoto T., Yasuda S., Kasai R.S., Nakano R., Hikiri S., Sugaya K., Hayashi T., Ogasawara S., Shiroishi M., Fujiwara T.K., Kinoshita M., Murata T.
A methodology for creating mutants of G-protein coupled receptors stabilized in active state by combining statistical thermodynamics and evolutionary molecular engineering
Protein Science
Murakami A., Noda S., Kazuta T., Hirano S., Kimura S., Nakanishi H., Matsuo K., Tsujikawa K., Iida M., Koike H., Sakamoto K., Hara Y., Kuru S., Kadomatsu K., Shimamura T., Ogi T., Katsuno M.
Metabolome and transcriptome analysis on muscle of sporadic inclusion body myositis
Annals of Clinical and Translational Neurology
Annals of Clinical and Translational Neurology
Establishment of induced pluripotent stem cells from a patient with 16p13.11 duplication and VPS13B deletion
Stem Cell Research
Go S., Sato C., Hane M., Go S., Kitajima K.
Implication of N-glycolylneuraminic acid in regulation of cell adhesiveness of C2C12 myoblast cells during differentiation into myotube cells
Glycoconjugate Journal
Hagino R., Mozaki K., Komura N., Imamura A., Ishida H., Ando H., Tanaka H.-N.
Straightforward Synthesis of the Poly(ADP-ribose) Branched Core Structure
ACS Omega
Yoshida Y., Zheng T., Tanabe W., Tomoike F., Hashiya F., Suzuki T., Hirota S., Saiki Y., Horii A., Hirayama A., Soga T., Kimura Y., Abe H.
Development of Fluorophosphoramidate as a Biocompatibly Transformable Functional Group and its Application as a Phosphate Prodrug for Nucleoside Analogs
ChemMedChem
Tsukada F., Takashima S., Wakihara Y., Kamatari Y.O., Shimizu K., Okada A., Inoshima Y.
Characterization of miRNAs in Milk Small Extracellular Vesicles from Enzootic Bovine Leukosis Cattle
International Journal of Molecular Sciences
Wen P., Chen J., Zuo C., Gao X., Fujita M., Yang G.
Proteome and Glycoproteome Analyses Reveal the Protein N-Linked Glycosylation Specificity of STT3A and STT3B
Cells
Osada N., Nagae M., Nakano M., Hirata T., Kizuka Y.
Examination of differential glycoprotein preferences of N-acetylglucosaminyltransferase-IV isozymes a and b
Journal of Biological Chemistry
Yan M., Komatsu N., Muro R., Huynh N.C.-N., Tomofuji Y., Okada Y., Suzuki H.I., Takaba H., Kitazawa R., Kitazawa S., Pluemsakunthai W., Mitsui Y., Satoh T., Okamura T., Nitta T., Im S.-H., Kim C.J., Kollias G., Tanaka S., Okamoto K., Tsukasaki M., Takayanagi H.
ETS1 governs pathological tissue-remodeling programs in disease-associated fibroblasts
Nature Immunology
Takashima S., Fujita H., Toyoshi K., Ohba A., Hirata Y., Shimozawa N., Oh-hashi K.
Hypomorphic mutation of PEX3 with peroxisomal mosaicism reveals the oscillating nature of peroxisome biogenesis coupled with differential metabolic activities
Molecular Genetics and Metabolism
https://doi.org/10.1016/j.ymgme.2022.07.008Kushima I., Nakatochi M., Aleksic B., Okada T., Kimura H., Kato H., Morikawa M., Inada T., Ishizuka K., Torii Y., Nakamura Y., Tanaka S., Imaeda M., Takahashi N., Yamamoto M., Iwamoto K., Nawa Y., Ogawa N., Iritani S., Hayashi Y., Lo T., Otgonbayar G., Furuta S., Iwata N., Ikeda M., Saito T., Ninomiya K., Okochi T., Hashimoto R., Yamamori H., Yasuda Y., Fujimoto M., Miura K., Itokawa M., Arai M., Miyashita M., Toriumi K., Ohi K., Shioiri T., Kitaichi K., Someya T., Watanabe Y., Egawa J., Takahashi T., Suzuki M., Sasaki T., Tochigi M., Nishimura F., Yamasue H., Kuwabara H., Wakuda T., Kato T.A., Kanba S., Horikawa H., Usami M., Kodaira M., Watanabe K., Yoshikawa T., Toyota T., Yokoyama S., Munesue T., Kimura R., Funabiki Y., Kosaka H., Jung M., Kasai K., Ikegame T., Jinde S., Numata S., Kinoshita M., Kato T., Kakiuchi C., Yamakawa K., Suzuki T., Hashimoto N., Ishikawa S., Yamagata B., Nio S., Murai T., Son S., Kunii Y., Yabe H., Inagaki M., Goto Y.-I., Okumura Y., Ito T., Arioka Y., Mori D., Ozaki N.
Cross-Disorder Analysis of Genic and Regulatory Copy Number Variations in Bipolar Disorder, Schizophrenia, and Autism Spectrum Disorder
Biological Psychiatry
https://doi.org/10.1016/j.biopsych.2022.04.003Kushima I., Imaeda M., Tanaka S., Kato H., Oya-Ito T., Nakatochi M., Aleksic B., Ozaki N.
Contribution of copy number variations to the risk of severe eating disorders
Psychiatry and Clinical Neurosciences
https://doi.org/10.1111/pcn.13430Morikawa C., Sugiura K., Kondo K., Yamamoto Y., Kojima Y., Ozawa Y., Yoshioka H., Miura N., Piao J., Okada K., Hanamatsu H., Tsuda M., Tanaka S., Furukawa J.-I., Shinohara Y.
Evaluation of the context of downstream N- and free N-glycomic alterations induced by swainsonine in HepG2 cells
Biochimica et Biophysica Acta – General Subjects
https://doi.org/10.1016/j.bbagen.2022.130168Nakagawa Y., Oya Y., Ojika M., Igarashi Y., Ito Y.
Chemical modification of pradimicin A to suppress aggregation without impairing D-mannose-binding and antifungal activities
Tetrahedron
https://doi.org/10.1016/j.tet.2022.132919Higashi S.L., Shintani Y., Ikeda M.
Installing Reduction Responsiveness into Biomolecules by Introducing Nitroaryl Groups
Chemistry – A European Journal
https://doi.org/10.1002/chem.202201103Wu D., Gilormini P.-A., Toda S., Biot C., Lion C., Guérardel Y., Sato C., Kitajima K.
A novel C-domain-dependent inhibition of the rainbow trout CMP-sialic acid synthetase activity by CMP-deaminoneuraminic acid
Biochemical and Biophysical Research Communications
https://doi.org/10.1016/j.bbrc.2022.05.031
Tsuchiya A., Kobayashi M., Kamatari Y.O., Mitsunaga T., Yamauchi K.
Development of flavonoid probes and the binding mode of the target protein and quercetin derivatives
Bioorganic and Medicinal Chemistry
https://doi.org/10.1016/j.bmc.2022.116854Hirata T., Takata M., Tokoro Y., Nakano M., Kizuka Y.
Shedding of N-acetylglucosaminyltransferase-V is regulated by maturity of cellular N-glycan
Communications biology
https://doi.org/10.1038/s42003-022-03697-yHamaya Y., Komura N., Imamura A., Ishida H., Ando H., Tanaka H.-N.
Protecting-group- and microwave-free synthesis of β-glycosyl esters and aryl β-glycosides of N-acetyl-D-glucosamine
Bioorganic and Medicinal Chemistry
https://doi.org/10.1016/j.bmc.2022.116852Segi N., Ozaki T., Suzuki Y., Ouchida J., Imagama S., Kadomatsu K., Sakamoto K.
Close association of polarization and LC3, a marker of autophagy, in axon determination in mouse hippocampal neurons
Experimental Neurology
https://doi.org/10.1016/j.expneurol.2022.114112Nishiguchi S., Furuta T., Uchihashi T.
Multiple dimeric structures and strand-swap dimerization of E-cadherin in solution visualized by high-speed atomic force microscopy
Proceedings of the National Academy of Sciences of the United States of America
https://doi.org/10.1073/pnas.2208067119Tsukamoto Y., Ogawa M., Yogi K., Tashima Y., Takeuchi H., Okajima T.
Glycoproteomics of NOTCH1 EGF repeat fragments overexpressed with different glycosyltransferases in HEK293T cells reveals insights into O-GlcNAcylation of NOTCH1
Glycobiology
https://doi.org/10.1093/glycob/cwac015Kushima I., Uematsu M., Ishizuka K., Aleksic B., Ozaki N.
Psychiatric patients with a de novo 17q12 deletion: Two case reports
Psychiatry and Clinical Neurosciences
https://doi.org/10.1111/pcn.13367Abe N., Imaeda A., Inagaki M., Li Z., Kawaguchi D., Onda K., Nakashima Y., Uchida S., Hashiya F., Kimura Y., Abe H.
Complete Chemical Synthesis of Minimal Messenger RNA by Efficient Chemical Capping Reaction
ACS Chemical Biology
https://doi.org/10.1021/acschembio.1c00996Hatanaka R., Araki E., Hane M., Go S., Wu D., Kitajima K., Sato C.
The α2,8-sialyltransferase 6 (St8sia6) localizes in the ER and enhances the anchorage-independent cell growth in cancer
Biochemical and Biophysical Research Communications
https://doi.org/10.1016/j.bbrc.2022.03.146Tanaka S., Morita M., Yamagishi T., Madapally H.V., Hayashida K., Khandelia H., Gerle C., Shigematsu H., Oshima A., Abe K.
Structural Basis for Binding of Potassium-Competitive Acid Blockers to the Gastric Proton Pump
Journal of medicinal chemistry
https://doi.org/10.1021/acs.jmedchem.2c00338
Umezawa F., Natsume M., Fukusada S., Nakajima K., Yamasaki F., Kawashima H., Kuo C.-W., Khoo K.-H., Shimura T., Yagi H., Kato K.
Cancer Malignancy Is Correlated with Upregulation of PCYT2-Mediated Glycerol Phosphate Modification of α-Dystroglycan
International Journal of Molecular Sciences
https://doi.org/10.3390/ijms23126662Ito K.N., Isobe K., Osakada F.
Fast z-focus controlling and multiplexing strategies for multiplane two-photon imaging of neural dynamics
Neuroscience Research
https://doi.org/10.1016/j.neures.2022.03.007Vibhute A.M., Tanaka H.-N., Mishra S.K., Osuka R.F., Nagae M., Yonekawa C., Korekane H., Doerksen R.J., Ando H., Kizuka Y.
Structure-based design of UDP-GlcNAc analogs as candidate GnT-V inhibitors
Biochimica et Biophysica Acta – General Subjects
https://doi.org/10.1016/j.bbagen.2022.130118Shibata A., Higashi S.L., Ikeda M.
Nucleic acid-based fluorescent sensor systems: a review
Polymer Journal
https://doi.org/10.1038/s41428-022-00623-1Wang Y., Kanie K., Takezawa T., Horikawa M., Kaneko K., Sugimoto A., Yamawaki-Ogata A., Narita Y., Kato R.
Bi-layered carboxymethyl cellulose-collagen vitrigel dual-surface adhesion-prevention membrane
Carbohydrate Polymers
https://doi.org/10.1016/j.carbpol.2022.119223Takahashi M., Komura N., Yoshida Y., Yamaguchi E., Hasegawa A., Tanaka H.-N., Imamura A., Ishida H., Suzuki K.G.N., Ando H.
Development of lacto-series ganglioside fluorescent probe using late-stage sialylation and behavior analysis with single-molecule imaging
RSC Chemical Biology
https://doi.org/10.1039/d2cb00083kDaher W., Leclercq L.-D., Johansen M.D., Hamela C., Karam J., Trivelli X., Nigou J., Guérardel Y., Kremer L.
Glycopeptidolipid glycosylation controls surface properties and pathogenicity in Mycobacterium abscessus
Cell Chemical Biology
https://doi.org/10.1016/j.chembiol.2022.03.008Higashi S.L., Isogami A., Takahashi J., Shibata A., Hirosawa K.M., Suzuki K.G.N., Sawada S., Tsukiji S., Matsuura K., Ikeda M.
Construction of a Reduction-responsive DNA Microsphere using a Reduction-cleavable Spacer based on a Nitrobenzene Scaffold
Chemistry – An Asian Journal
https://doi.org/10.1002/asia.202200142Hane M., Kitajima K., Sato C.
Comprehensive Analysis of Oligo/Polysialylglycoconjugates in Cancer Cell Lines
International Journal of Molecular Sciences
https://doi.org/10.3390/ijms23105569Toyama M., Takasaki Y., Branko A., Kimura H., Kato H., Nawa Y., Kushima I., Ishizuka K., Shimamura T., Ogi T., Ozaki N.
Exome sequencing of Japanese schizophrenia multiplex families supports the involvement of calcium ion channels
PLoS ONE
https://doi.org/10.1371/journal.pone.0268321Takahashi Y., Abe C., Hane M., Wu D., Kitajima K., Sato C.
Polysialylation in a DISC1 Mutant Mouse
International Journal of Molecular Sciences
https://doi.org/10.3390/ijms23095207Kimura S., Kamishina H., Hirata Y., Furuta K., Furukawa Y., Yamato O., Maeda S., Kamatari Y.O.
Novel oxindole compounds inhibit the aggregation of amyloidogenic proteins associated with neurodegenerative diseases
Biochimica et Biophysica Acta – General Subjects
https://doi.org/10.1016/j.bbagen.2022.130114Masaki Y., Yamaguchi M., Takeuchi R.F., Osakada F.
Monosynaptic rabies virus tracing from projection-targeted single neurons
Neuroscience Research
https://doi.org/10.1016/j.neures.2022.01.007Hirata T., Takekiyo T., Yoshimura Y., Tokoro Y., Ishizaki T., Kizuka Y., Kuroda K.
Cryostorage of unstable N-acetylglucosaminyltransferase-V by synthetic zwitterions
RSC Advances
https://doi.org/10.1039/d2ra01575gHasegawa Y., Motoyama M., Hamamoto A., Kimura S., Kamatari Y.O., Kamishina H., Oh-Hashi K., Furuta K., Hirata Y.
Identification of Novel Oxindole Compounds That Suppress ER Stress-Induced Cell Death as Chemical Chaperones
ACS Chemical Neuroscience
https://doi.org/10.1021/acschemneuro.2c00064Mery A., Jawhara S., François N., Cornu M., Poissy J., Martinez-Esparza M., Poulain D., Sendid B., Guerardel Y.
Identification of fungal trehalose for the diagnosis of invasive candidiasis by mass spectrometry
Biochimica et Biophysica Acta – General Subjects
https://doi.org/10.1016/j.bbagen.2022.130083Araki E., Hane M., Hatanaka R., Kimura R., Tsuda K., Konishi M., Komura N., Ando H., Kitajima K., Sato C.
Analysis of biochemical features of ST8 α-N-acetyl-neuraminide α2,8-sialyltransferase (St8sia) 5 isoforms
Glycoconjugate Journal
https://doi.org/10.1007/s10719-021-10034-8Suga H., Okumura R., Ikawa M., Shimizu M., Kageyama K.
A natural two-nucleotide deletion affirms role for NADPH oxidase in pathogenicity and perithecium formation in Fusarium graminearum species complex
Plant Pathology
https://doi.org/10.1111/ppa.13499Kudo Y., Endo S., Fujita M., Ota A., Kamatari Y.O., Tanaka Y., Ishikawa T., Ikeda H., Okada T., Toyooka N., Fujimoto N., Matsunaga T., Ikari A.
Discovery and Structure-Based Optimization of Novel Atg4B Inhibitors for the Treatment of Castration-Resistant Prostate Cancer
Journal of Medicinal Chemistry
https://doi.org/10.1021/acs.jmedchem.1c02113Yan S., Hodžić A., Bandini G., Yang G., Vanbeselaere J., Guérardel Y.
Characterization, Biosynthesis and Biological Functions of Novel Glyco-Epitopes
Frontiers in Molecular Biosciences
https://doi.org/10.3389/fmolb.2022.871037Akıl C., Ali S., Tran L.T., Gaillard J., Li W., Hayashida K., Hirose M., Kato T., Oshima A., Fujishima K., Blanchoin L., Narita A., Robinson R.C.
Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution
Science Advances
https://doi.org/10.1126/sciadv.abm2225Oka N., Kanda M., Furuzawa M., Arai W., Ando K.
Synthesis of Truncated Carbocyclic Nucleosides Using 5′-Deoxy-5′-Heteroarylsulfonylnucleosides
Current Protocols
https://doi.org/10.1002/cpz1.398Seo N., Nakamura J., Kaneda T., Tateno H., Shimoda A., Ichiki T., Furukawa K., Hirabayashi J., Akiyoshi K., Shiku H.
Distinguishing functional exosomes and other extracellular vesicles as a nucleic acid cargo by the anion-exchange method
Journal of Extracellular Vesicles
https://doi.org/10.1002/jev2.12205Wang W., Okajima T., Takeuchi H.
Significant Roles of Notch O-Glycosylation in Cancer
Molecules
https://doi.org/10.3390/molecules27061783Hirata T., Kobayashi A., Furuse T., Yamada I., Tamura M., Tomita H., Tokoro Y., Ninomiya A., Fujihara Y., Ikawa M., Maeda Y., Murakami Y., Kizuka Y., Kinoshita T.
Loss of the N-acetylgalactosamine side chain of the GPI-anchor impairs bone formation and brain functions and accelerates the prion disease pathology
Journal of Biological Chemistry
https://doi.org/10.1016/j.jbc.2022.101720Osuka R.F., Hirata T., Nagae M., Nakano M., Shibata H., Okamoto R., Kizuka Y.
N-acetylglucosaminyltransferase-V requires a specific noncatalytic luminal domain for its activity toward glycoprotein substrates
Journal of Biological Chemistry
https://doi.org/10.1016/j.jbc.2022.101666Matsui Y., Abe Y., Uno K., Miyano S.
RoDiCE: Robust differential protein co-expression analysis for cancer complexome
Bioinformatics
https://doi.org/10.1093/bioinformatics/btab612Kuzuya M., Hirano H., Hayashida K., Watanabe M., Kobayashi K., Terada T., Mahmood M.I., Tama F., Tani K., Fujiyoshi Y., Oshima A.
Structures of human pannexin-1 in nanodiscs reveal gating mediated by dynamic movement of the N terminus and phospholipids
Science Signaling
https://doi.org/10.1126/scisignal.abg6941Shintani Y., Ohtomi T., Shibata A., Kitamura Y., Hirosawa K.M., Suzuki K.G.N., Ikeda M.
Formation of Supramolecular Nanostructures through in Situ Self-Assembly and Post-Assembly Modification of a Biocatalytically Constructed Dipeptide Hydrazide
Chemistry – A European Journal
https://doi.org/10.1002/chem.202104421Li F.J., Komura R., Nakashima C., Shimizu M., Kageyama K., Suga H.
Molecular Diagnosis of Thiophanate-Methyl-Resistant Strains of Fusarium fujikuroi in Japan
Plant Disease
https://doi.org/10.1094/PDIS-07-21-1501-REVu H., Muto Y., Hayashi M., Noguchi H., Tanaka K., Yamamoto Y.
Complete Genome Sequences of Three Phocaeicola vulgatus Strains Isolated from a Healthy Japanese Individual
Microbiology Resource Announcements
https://doi.org/10.1128/mra.01124-21Oda M., Sano T., Kamatari Y.O., Abe Y., Ikura T., Ito N.
Structural Analysis of Hen Egg Lysozyme Refolded after Denaturation at Acidic pH
Protein Journal
https://doi.org/10.1007/s10930-021-10036-3Ozaki H., Asano T., Tanaka H.-N., Komura N., Ando H., Ishida H., Imamura A.
Blockwise synthesis of polylactosamine fragments and keratan sulfate oligosaccharides comprised of dimeric Galβ(1 → 4)GlcNAc6Sβ
Carbohydrate Research
https://doi.org/10.1016/j.carres.2022.108502Miyanishi W., Ojika M., Akase D., Aida M., Igarashi Y., Ito Y., Nakagawa Y.
D-Mannose binding, aggregation property, and antifungal activity of amide derivatives of pradimicin A
Bioorganic and Medicinal Chemistry
https://doi.org/10.1016/j.bmc.2021.116590Suzuki H.I., Onimaru K.
Biomolecular condensates in cancer biology
Cancer Science
https://doi.org/10.1111/cas.15232Sugiura S., Shintani Y., Mori D., Higashi S.L., Shibata A., Kitamura Y., Kawano S.-I., Hirosawa K.M., Suzuki K.G.N., Ikeda M.
Design of supramolecular hybrid nanomaterials comprising peptide-based supramolecular nanofibers and in situ generated DNA nanoflowers through rolling circle amplification
Nanoscale
https://doi.org/10.1039/d2nr04556gSuzuki K., Nishio N., Kimura H., Tokura T., Kishi S., Ozaki N., Fujimoto Y., Sone M.
Comparison of quality of life and psychological distress in patients with tongue cancer undergoing a total/subtotal glossectomy or extended hemiglossectomy and free flap transfer: a prospective evaluation
International Journal of Oral and Maxillofacial Surgery
https://doi.org/10.1016/j.ijom.2022.11.010Lo T., Kushima I., Aleksic B., Yoshimi A., Someya T., Watanabe Y., Ozaki N.
Clinical manifestations of schizophrenia in four patients with variants in voltage-gated calcium channel-encoding genes: a case series
Psychiatry and Clinical Neurosciences
https://doi.org/10.1111/pcn.13494Ando H., Komura N., Tanaka H.-N., Imamura A., Ishida H.
Chemical synthesis of sialoglyco-architectures
Advances in Carbohydrate Chemistry and Biochemistry
https://doi.org/10.1016/bs.accb.2022.09.003Kato H., Kimura H., Kushima I., Takahashi N., Aleksic B., Ozaki N.
The genetic architecture of schizophrenia: review of large-scale genetic studies
Journal of Human Genetics
https://doi.org/10.1038/s10038-022-01059-4Ma C., Tsukamoto Y., Takeuchi H.
Generation of Properly Folded Epidermal Growth Factor-Like (EGF) Repeats and Glycosyltransferases Enables In Vitro O-Glycosylation
Methods in Molecular Biology
https://doi.org/10.1007/978-1-0716-2201-8_3Yoshino S., Suzuki H.I.
The molecular understanding of super-enhancer dysregulation in cancer
Nagoya Journal of Medical Science
https://doi.org/10.18999/nagjms.84.2.216Kataoka K., Suzuki S., Tenno T., Goda N., Hibino E., Oshima A., Hiroaki H.
A cryptic phosphate-binding pocket on the SPFH domain of human stomatin that regulates a novel fibril-like self-assembly
Current Research in Structural Biology
https://doi.org/10.1016/j.crstbi.2022.05.002Horii Y., Okadera K., Miyawaki S., Shiina T., Shimizu Y.
Suncus murinus as a novel model animal that is suitable for elucidating the mechanism of daily torpor
Biomedical Research (Japan)
https://doi.org/10.2220/biomedres.43.53Hu D., Hirabayashi J.
Transformation of Agrocybe cylindracea Galectin into αGalNAc-Specific Lectin
Methods in Molecular Biology
https://doi.org/10.1007/978-1-0716-2055-7_14Nakagawa Y., Ito Y.
Mannose-binding analysis and biological application of pradimicins
Proceedings of the Japan Academy Series B: Physical and Biological Sciences
https://doi.org/10.2183/pjab.98.002
2021
Tseng H.-C., Hsiao C.-T., Yamakawa N., Guérardel Y., Khoo K.-H.
Discovery Sulfoglycomics and Identification of the Characteristic Fragment Ions for High-Sensitivity Precise Mapping of Adult Zebrafish Brain–Specific Glycotopes
Frontiers in Molecular Biosciences
doi: https://doi.org/10.3389/fmolb.2021.771447Oka N., Hirabayashi H., Kumada K., Ando K.
Synthesis of xanthosine 2-phosphate diesters via phosphitylation of the carbonyl group
Bioorganic and Medicinal Chemistry Letters
doi: https://doi.org/10.1016/j.bmcl.2021.128439Hiraoka H., Shu Z., Tri Le B., Masuda K., Nakamoto K., Fangjie L., Abe N., Hashiya F., Kimura Y., Shimizu Y., Veedu R.N., Abe H.
Antisense Oligonucleotide Modified with Disulfide Units Induces Efficient Exon Skipping in mdx Myotubes through Enhanced Membrane Permeability and Nucleus Internalization
ChemBioChem
doi: https://doi.org/10.1002/cbic.202100413Oka N., Kanda M., Furuzawa M., Arai W., Ando K.
Serendipitous One-Step Synthesis of Cyclopentene Derivatives from 5′-Deoxy-5′-heteroarylsulfonylnucleosides as Nucleoside-Derived Julia-Kocienski Reagents
Journal of Organic Chemistry
doi: https://doi.org/10.1021/acs.joc.1c01940Yamaoka K., Oikawa R., Abe N., Nakamoto K., Tomoike F., Hashiya F., Kimura Y., Abe H.
Completely Chemically Synthesized Long DNA Can be Transcribed in Human Cells
ChemBioChem
doi: https://doi.org/10.1002/cbic.202100312Hayakawa T., Terahara M., Fujito N.T., Matsunaga T., Teshima K.M., Hane M., Kitajima K., Sato C., Takahata N., Satta Y.
Lower promoter activity of the ST8SIA2 gene has been favored in evolving human collective brains
PLoS ONE
doi: https://doi.org/10.1371/journal.pone.0259897Ogami K., Suzuki H.I.
Nuclear rna exosome and pervasive transcription: Dual sculptors of genome function
International Journal of Molecular Sciences
doi: https://doi.org/10.3390/ijms222413401Wu D., Arakawa H., Fujita A., Hashimoto H., Hibi M., Naruse K., Kamei Y., Sato C., Kitajima K.
A point-mutation in the C-domain of CMP-sialic acid synthetase leads to lethality of medaka due to protein insolubility
Scientific Reports
doi: https://doi.org/10.1038/s41598-021-01715-3Nagai R., Sugimachi A., Tanimoto Y., Suzuki K.G.N., Hayashi F., Weikert D., Gmeiner P., Kasai R.S., Morigaki K.
Functional Reconstitution of Dopamine D2 Receptor into a Supported Model Membrane in a Nanometric Confinement
Advanced Biology
doi: https://doi.org/10.1002/adbi.202100636Yagi-Utsumi M., Aoki K., Watanabe H., Song C., Nishimura S., Satoh T., Yanaka S., Ganser C., Tanaka S., Schnapka V., Goh E.W., Furutani Y., Murata K., Uchihashi T., Arakawa K., Kato K.
Desiccation-induced fibrous condensation of CAHS protein from an anhydrobiotic tardigrade
Scientific Reports
doi: https://doi.org/10.1038/s41598-021-00724-6Oka N., Suzuki K., Mori A., Ando K.
Stereoselective Synthesis of 1,2-cis-Glycosyl Sulfones and Their Application in One-Pot Julia Olefination for the Synthesis of exo-Glycals
European Journal of Organic Chemistry
doi: https://doi.org/10.1002/ejoc.202101202Machino M., Gong Y., Ozaki T., Suzuki Y., Watanabe E., Imagama S., Kadomatsu K., Sakamoto K.
Dermatan sulphate is an activating ligand of anaplastic lymphoma kinase
Journal of Biochemistry
doi: https://doi.org/10.1093/jb/mvab085Inden M., Takagi A., Kitai H., Ito T., Kurita H., Honda R., Kamatari Y.O., Nozaki S., Wen X., Hijioka M., Kitamura Y., Hozumi I.
Kaempferol has potent protective and antifibrillogenic effects for α-synuclein neurotoxicity in vitro
International Journal of Molecular Sciences
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Heteropolysaccharides from S. cerevisiae show anti-adhesive properties against E. coli associated with Crohn’s disease
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Chemical Record
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Oncogene
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Synthesis of Diverse Seleno-Glycolipids via the Transacetalization of Selenoacetals
European Journal of Organic Chemistry
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Development of an Amino Sugar-Based Supramolecular Hydrogelator with Reduction Responsiveness
Journal of the American Chemical Society
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A Pradimicin-Based Staining Dye for Glycoprotein Detection
Journal of Natural Products
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Tissue-specific regulation of hnk-1 biosynthesis by bisecting glcnac
Molecules
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Chemistry – A European Journal
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Tardigrade Secretory-Abundant Heat-Soluble Protein Has a Flexible β-Barrel Structure in Solution and Keeps This Structure in Dehydration
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Reconstruction of Three-Dimensional Conformations of Bacterial ClpB from High-Speed Atomic-Force-Microscopy Images
Frontiers in Molecular Biosciences
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Peptide sequence mapping around bisecting glcnac‐bearing n‐glycans in mouse brain
International Journal of Molecular Sciences
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Biochimica et Biophysica Acta – Biomembranes
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Variety of Nucleotide Polymerase Mutants Aiming to Synthesize Modified RNA
ChemBioChem
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Introduction of an Oxidation-responsive 4-Boronobenzyl Group into an Oligonucleotide through a Postmodification Approach
Chemistry Letters
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Novel reporters of mitochondria-associated membranes (MAM), MAMtrackers, demonstrate MAM disruption as a common pathological feature in amyotrophic lateral sclerosis
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Zebrafish model of human Zellweger syndrome reveals organ-specific accumulation of distinct fatty acid species and widespread gene expression changes
Molecular Genetics and Metabolism
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The Involvement of Cellular Glycans in Alzheimer’s Disease
Comprehensive Glycoscience: Second Editition
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Glycans in Chronic Obstructive Pulmonary Disease (COPD)
Comprehensive Glycoscience: Second Edition
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Axonal Regeneration by Glycosaminoglycan
Frontiers in Cell and Developmental Biology
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The protein tyrosine phosphatase SHP-1 (PTPN6) but Not CD45 (PTPRC) is essential for the ligand-mediated regulation of CD22 in BCR-ligated b cells
Journal of Immunology
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Type IIa RPTPs and glycans: Roles in axon regeneration and synaptogenesis
International Journal of Molecular Sciences
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Human SND2 mediates ER targeting of GPI-anchored proteins with low hydrophobic GPI attachment signals
FEBS Letters
doi: https://doi.org/10.1002/1873-3468.14083Ito S., Ozaki T., Morozumi M., Imagama S., Kadomatsu K., Sakamoto K.
Enoxaparin promotes functional recovery after spinal cord injury by antagonizing PTPRσ
Experimental Neurology
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Construction of a reduction-responsive oligonucleotide via a post-modification approach utilizing 4-nitrophenyl diazomethane
Polymer Journal
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Polysialylation and disease
Molecular Aspects of Medicine
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Global mapping of glycosylation pathways in human-derived cells
Developmental Cell
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Structure, Synthesis and Inhibition Mechanism of Nucleoside Analogues as HIV-1 Reverse Transcriptase Inhibitors (NRTIs)
ChemMedChem
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Evolutionary conservation of human ketodeoxynonulosonic acid production is independent of sialoglycan biosynthesis
Journal of Clinical Investigation
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Effect of side chain phenyl group on the self-assembled morphology of dipeptide hydrazides
Peptide Science
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Bioinformatics and functional analyses implicate potential roles for EOGT and L-fringe in pancreatic cancers
Molecules
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Identification of PTPRσ-interacting proteins by proximity-labelling assay
Journal of Biochemistry
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Current views on the roles of o‐glycosylation in controlling notch‐ligand interactions
Biomolecules
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Comparison of Phenotypic and Genotypic Patterns of Antimicrobial-Resistant Bacteroides fragilis Group Isolated from Healthy Individuals in Vietnam and Japan
Infection and Drug Resistance
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Development of Urinary Diagnostic Biomarker for IgA Nephropathy by Lectin Microarray
American Journal of Nephrology
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Various methods for controlling the bakanae disease in rice
Reviews in Agricultural Science
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Extracellular Vesicles and Glycosylation
Advances in Experimental Medicine and Biology
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N-Glycosylation
Advances in Experimental Medicine and Biology
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Screening of novel Midkine binding protein by BioID2-based proximity labeling
Nagoya Journal of Medical Science
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Regulation of axonal regeneration and its inhibition by glycan ligands
Trends in Glycoscience and Glycotechnology
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Monomeric a-synuclein (aS) inhibits amyloidogenesis of human prion protein (hPrP) by forming a stable aS-hPrP hetero-dimer.
Prion
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Binding evaluation of pradimicins for oligomannose motifs from fungal mannans
Bulletin of the Chemical Society of Japan
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Identification and functional characterization of a Siglec-7 counter-receptor on K562 cells
Journal of Biological Chemistry
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ABCA13 dysfunction associated with psychiatric disorders causes impaired cholesterol trafficking
Journal of Biological Chemistry
doi: https://doi.org/10.1074/jbc.RA120.015997Kitano M., Kizuka Y., Sobajima T., Nakano M., Nakajima K., Misaki R., Itoyama S., Harada Y., Harada A., Miyoshi E., Taniguchi N.
Rab11-mediated post-Golgi transport of the sialyltransferase ST3GAL4 suggests a new mechanism for regulating glycosylation
Journal of Biological Chemistry
doi: https://doi.org/10.1016/j.jbc.2021.100354Oka N., Mori A., Suzuki K., Ando K.
Stereoselective Synthesis of Ribofuranoid exo-Glycals by One-Pot Julia Olefination Using Ribofuranosyl Sulfones
Journal of Organic Chemistry
doi: https://doi.org/10.1021/acs.joc.0c02297Yoshimura A., Hatanaka R., Tanaka H., Kitajima K., Sato C.
The conserved arginine residue in all siglecs is essential for Siglec-7 binding to sialic acid
Biochemical and Biophysical Research Communications
doi: https://doi.org/10.1016/j.bbrc.2020.10.023Hashimoto M., Fukamizu A., Nakagawa T., Kizuka Y.
Roles of protein arginine methyltransferase 1 (PRMT1) in brain development and disease
Biochimica et Biophysica Acta – General Subjects
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2020
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One-Pot Construction of Multicomponent Supramolecular Materials Comprising Self-Sorted Supramolecular Architectures of DNA and Semi-Artificial Glycopeptides
ACS Applied Bio Materials
doi: https://doi.org/10.1021/acsabm.0c01316Komura N., Suzuki K.G.N., Ando H., Konishi M., Hirose Y., Suganuma Y., Tanaka H.-N., Imamura A., Ishida H.
Development of fluorescent ganglioside GD3 and Gq1b analogs for elucidation of raft-associated interactions
Journal of Organic Chemistry
doi: https://doi.org/10.1021/acs.joc.0c01493Yagami N., Vibhute A.M., Tanaka H.-N., Komura N., Imamura A., Ishida H., Ando H.
Stereoselective Synthesis of Diglycosyl Diacylglycerols with Glycosyl Donors Bearing a β-Stereodirecting 2,3-Naphthalenedimethyl Protecting Group
Journal of Organic Chemistry
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Sulfonamide antibiotics inhibit RNAi by binding to human Argonaute protein 2 PAZ
Bioorganic and Medicinal Chemistry Letters
doi: https://doi.org/10.1016/j.bmcl.2020.127637Higashi S.L., Rozi N., Hanifah S.A., Ikeda M.
Supramolecular architectures of nucleic acid/peptide hybrids
International Journal of Molecular Sciences
doi: https://doi.org/10.3390/ijms21249458Hirata T., Nagae M., Osuka R.F., Mishra S.K., Yamada M., Kizuka Y.
Recognition of glycan and protein substrates by N-acetylglucosaminyltransferase-V
Biochimica et Biophysica Acta – General Subjects
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Glycoproteomic analysis identifies cryptdin-related sequence 1 as O-glycosylated protein modified with α1,2-fucose in the small intestine
Archives of Biochemistry and Biophysics
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Comparative studies of polysialic acids derived from five different vertebrate brains
International Journal of Molecular Sciences
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Sialic acid sulfation is induced by the antibiotic treatment in mammalian cells
Bioscience, Biotechnology and Biochemistry
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High-speed single-molecule imaging reveals signal transduction by induced transbilayer raft phases
Journal of Cell Biology
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Phosphorothioate Modification of mRNA Accelerates the Rate of Translation Initiation to Provide More Efficient Protein Synthesis
Angewandte Chemie – International Edition
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Differential labeling of glycoproteins with alkynyl fucose analogs
International Journal of Molecular Sciences
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Combinational analyses with multiple methods reveal the existence of several forms of polysialylated neural cell adhesion molecule in mouse developing brains
International Journal of Molecular Sciences
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Indirect synthetic route to α-l-fucosides: Via highly stereoselective construction of α-l-galactosides followed by C6-deoxygenation
Organic and Biomolecular Chemistry
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Control of Lipid Bilayer Phases of Cell-Sized Liposomes by Surface-Engineered Plasmonic Nanoparticles
Langmuir
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The SH3 domain in the fucosyltransferase FUT8 controls FUT8 activity and localization and is essential for core fucosylation
Journal of Biological Chemistrydoi:
doi: https://doi.org/10.1074/JBC.RA120.013079
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